Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1100 |
Symbol | |
ID | 6287708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1174948 |
End bp | 1176045 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624673 |
Product | AFG1-family ATPase |
Protein accession | YP_001898680 |
Protein GI | 187928193 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.875706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGTCC AGGAAACCTA CCTACAGGAA CTGAAGGCGC GCGGCTATCG GCCCGACGAA GCGCAGCAAC GCGCCGTCGA CCGCCTGCAG CGGTGTTACG ACGAATGGGT TGCCTACAAG GCCCGTCGTT CGAATGCGCT GCGCAAGATG CTCGTGCGGC CCGATTTGCC CCGTGGCGTC TACATGTGGG GCGGGGTGGG GCGCGGCAAG TCGTTCTTGA TGGATGCGTT CTATAGCTGC GTGCCGTTGG TGCGCAAGAC GCGACTGCAC TTTCACGAGT TCATGCGCGA AGTGCATCGC CAACTGGAAG AGCTGCGCGG TCGCGCCGAT CCGCTGGACG AACTGGCCCG CCGCATCGCC AAGCGCTACC GCCTGATCTG CTTTGACGAA TTCCACGTCA GCGACGTTGC CGACGCAATG ATCCTGCATC GCTTGCTGGA TCAGCTGTTT GCCAACGGCG TGCAGTTTGT GATGACGTCC AACTATCGGC CCGACTTGCT GTATCCGGAC GGCCTGCATC GCGACCGCGT GCTGCCGGCC ATTGCGCTGC TGCAGGAGAA GCTCGACGTC CTCAACGTCG ACGCAGGCGT CGACTACCGC AAGCGGGCGA TGGAGCAGGT GCAGGCGTAC TACACGCCAT TGGGCGCCAA GGCCAACTCG GCGTTGCGCG ATGCGTTTAC GGCGGTGGCC GGAGTGTCGG ACGAGTCGCC GGTGCTGCGC ATCGAGCATC GTGAGATTCG GGCAGCCCGT AAGGCCGGCG GTGTGGTGTG GTTCGACTTC GCCACGCTGT GCGGGGGACC GCGCTCACAG AACGATTACC TGGAAATCGC GTCGCGCTTT CATACCGTCA TCTTGGCCGA TGTACCGAAG ATGACGCCGC GCATGGCATC CGAAGCGCGC CGCTTCACGT GGCTGATCGA CGTGTTCTAC GACCACAAGG TCAAGCTGCT GATGTCGGCC GAGGTGCCGG CAGACGAGCT GTACACCGAA GGCCAGATGG CCAACGAATT CCAACGCACC GTGTCGCGCA TCGTCGAGAT GCAGTCGCGC GAATACCTCG AGGCACCTCG CCGCGAAGTG GACACGTCAC TGACGTGA
|
Protein sequence | MNVQETYLQE LKARGYRPDE AQQRAVDRLQ RCYDEWVAYK ARRSNALRKM LVRPDLPRGV YMWGGVGRGK SFLMDAFYSC VPLVRKTRLH FHEFMREVHR QLEELRGRAD PLDELARRIA KRYRLICFDE FHVSDVADAM ILHRLLDQLF ANGVQFVMTS NYRPDLLYPD GLHRDRVLPA IALLQEKLDV LNVDAGVDYR KRAMEQVQAY YTPLGAKANS ALRDAFTAVA GVSDESPVLR IEHREIRAAR KAGGVVWFDF ATLCGGPRSQ NDYLEIASRF HTVILADVPK MTPRMASEAR RFTWLIDVFY DHKVKLLMSA EVPADELYTE GQMANEFQRT VSRIVEMQSR EYLEAPRREV DTSLT
|
| |