Gene Rpic_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1100 
Symbol 
ID6287708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1174948 
End bp1176045 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID642624673 
ProductAFG1-family ATPase 
Protein accessionYP_001898680 
Protein GI187928193 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.875706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC AGGAAACCTA CCTACAGGAA CTGAAGGCGC GCGGCTATCG GCCCGACGAA 
GCGCAGCAAC GCGCCGTCGA CCGCCTGCAG CGGTGTTACG ACGAATGGGT TGCCTACAAG
GCCCGTCGTT CGAATGCGCT GCGCAAGATG CTCGTGCGGC CCGATTTGCC CCGTGGCGTC
TACATGTGGG GCGGGGTGGG GCGCGGCAAG TCGTTCTTGA TGGATGCGTT CTATAGCTGC
GTGCCGTTGG TGCGCAAGAC GCGACTGCAC TTTCACGAGT TCATGCGCGA AGTGCATCGC
CAACTGGAAG AGCTGCGCGG TCGCGCCGAT CCGCTGGACG AACTGGCCCG CCGCATCGCC
AAGCGCTACC GCCTGATCTG CTTTGACGAA TTCCACGTCA GCGACGTTGC CGACGCAATG
ATCCTGCATC GCTTGCTGGA TCAGCTGTTT GCCAACGGCG TGCAGTTTGT GATGACGTCC
AACTATCGGC CCGACTTGCT GTATCCGGAC GGCCTGCATC GCGACCGCGT GCTGCCGGCC
ATTGCGCTGC TGCAGGAGAA GCTCGACGTC CTCAACGTCG ACGCAGGCGT CGACTACCGC
AAGCGGGCGA TGGAGCAGGT GCAGGCGTAC TACACGCCAT TGGGCGCCAA GGCCAACTCG
GCGTTGCGCG ATGCGTTTAC GGCGGTGGCC GGAGTGTCGG ACGAGTCGCC GGTGCTGCGC
ATCGAGCATC GTGAGATTCG GGCAGCCCGT AAGGCCGGCG GTGTGGTGTG GTTCGACTTC
GCCACGCTGT GCGGGGGACC GCGCTCACAG AACGATTACC TGGAAATCGC GTCGCGCTTT
CATACCGTCA TCTTGGCCGA TGTACCGAAG ATGACGCCGC GCATGGCATC CGAAGCGCGC
CGCTTCACGT GGCTGATCGA CGTGTTCTAC GACCACAAGG TCAAGCTGCT GATGTCGGCC
GAGGTGCCGG CAGACGAGCT GTACACCGAA GGCCAGATGG CCAACGAATT CCAACGCACC
GTGTCGCGCA TCGTCGAGAT GCAGTCGCGC GAATACCTCG AGGCACCTCG CCGCGAAGTG
GACACGTCAC TGACGTGA
 
Protein sequence
MNVQETYLQE LKARGYRPDE AQQRAVDRLQ RCYDEWVAYK ARRSNALRKM LVRPDLPRGV 
YMWGGVGRGK SFLMDAFYSC VPLVRKTRLH FHEFMREVHR QLEELRGRAD PLDELARRIA
KRYRLICFDE FHVSDVADAM ILHRLLDQLF ANGVQFVMTS NYRPDLLYPD GLHRDRVLPA
IALLQEKLDV LNVDAGVDYR KRAMEQVQAY YTPLGAKANS ALRDAFTAVA GVSDESPVLR
IEHREIRAAR KAGGVVWFDF ATLCGGPRSQ NDYLEIASRF HTVILADVPK MTPRMASEAR
RFTWLIDVFY DHKVKLLMSA EVPADELYTE GQMANEFQRT VSRIVEMQSR EYLEAPRREV
DTSLT