| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1097 |
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| Symbol | sucA |
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| ID | 6289843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1169094 |
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| End bp | 1171958 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624670 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001898677 |
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| Protein GI | 187928190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00360454 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC TGTATAAGCA GTACCTGGAC ACTTCGTACC TGTCCGGCGG TAACGCCGCC
TACGTTGAAG ATCAGTACGA AGCGTACCTT CAAGATCCCA CGTCCGTTAG CGAGGCACTG
CGCGCGTACT TCGATGCGCT GCAGAACGTC CCCGCCGTCG ACGGTTCCAA CGCCCGGGAT
ATCCCCCACG CCCCCATCGT CACCTCGTTC GCCGAGCGCG CCAAGCATGG CCCGATCCGG
ACGATTGTCG CGTCTGCCGA TTCCGATATG GGTCGCAAGC GCGTGGCGGC GACGCAGCTG
GTGGCTGCCT ACCGCAATGT GGGCCTGCGT TGGGCCGATC TTGACCCGCT CAAGCGTCAG
GAGCGCCCCC CGGTTCCGGA TCTGGACCCG GCTTTCTACG GTTTCACCGA AGCCGACCAG
GACATCGTTT TCAACGCCAG CAATACGTAT TTCGGCAAGG AATCGATGAG CCTGCGCGAG
CTGGTCAACA ACCTGCGCGA AACGTACTGC GGCTCGATCG GCGCTGAGTT CATGTACATC
AGCGACCAGG CGCAAAAGCG CTGGTGGCAG GAGCGTCTGG AAACCATCCG CTCCAAGCCG
ACGTTCTCGG CTGAAAAGAA GAAGCACATC CTGGAACGCC TGACGGCCGC TGAAGGCCTC
GAGCGTTTCC TGCATACGAA GTACGTCGGT CAGAAGCGCT TCTCGCTGGA AGGCGGCGAG
AGCTTCATCG CGGCGATGGA CGAACTGATC CAGCATTCCG GCGCCAAGGG CGTGCAGGAA
ATCGTGATCG GCATGGCCCA CCGCGGCCGT CTGAACGTGC TGGTCAACAC GCTGGGCAAG
ATGCCGGCCG ACCTGTTTGC CGAATTCGAA GGCAAGCACG TGGACGACCT GCCGGCCGGT
GACGTGAAGT ACCACAAGGG CTTCTCGAGC GACGTGACCA CCCCCGGTGG CCCTGTCCAC
CTGTCGCTGG CGTTCAACCC GTCGCACCTG GAAATCGTCA ACCCGGTCGT GGAAGGGTCG
GTCAAGGCGC GCCAGGAGCG CCGCGACGAC AAGCACGGCG CGCAAGTGCT GGCTGTGCAA
GTGCACGGTG ACGCGGCCTT CGCCGGCCAG GGCGTTGTGA TGGAAACGCT GAACCTTGCG
CAAACGCGTG GTTATGGCAC GGGCGGCACG ATCCACATCG TCATCAACAA CCAGATCGGT
TTCACGACGT CGGACCCGCG CGACTCGCGC TCGACGCTGT ACTGTACCGA TGTGGTCAAG
ATGATTGAAG CGCCGGTGCT GCACGTCAAC GGCGACGATC CGGAAGCGGT CGTGCTGGCC
ATGCAACTGG CCGTGGACTT CCGTACGGAG TTCCAGAAGG ACATCGCGGT CGACATCATC
TGCTTCCGCA AGCTCGGCCA CAACGAGCAA GACACGCCGG CAATGACGCA GCCGCTGATG
TACAAGAAGA TCGGCACGCA CCCTGGCACG CGCAAGCTCT ACGCAGACAA GCTTGTCACG
CAGAACACGC TGAAGGCAGA AGAGCCGGAC GCCCTGGTGC AGGAATTCCG CGCCGCCATG
GACGCGGGCA AGCACACGGT TGATCCGGTG CTGTCGAACT TCAAGAACAA GTTCGCAGTG
GATTGGCTGC CGTTCCTGAA CCGCAAGTGG ACGGATGCAG CCGATACCGC CGTGCCGATG
GCCGAACTCA AGCGTCTGGC CGAGCGCATC ACCGCCATCC CCGATCACTT CAAGCTGCAC
CCGCTGGTTG AGAACGTCGT CAACAACCGC GCCAAGATGG GCAAGGGCGA GCAGGCGCTG
GACTGGGGCA TGGGCGAGCA CCTGGCTTTC GCATCGCTGG TGGCGTCGGG CTACCCCGTG
CGCATCACTG GTCAGGACGC CGGTCGCGGT ACGTTCACGC ACCGCCACGC CGTGCTGCAC
GATCAGAACC GCGAGCGTTG GGACGCCGGC AGCTACATCC CGCTGCAGAA CGTGTCGGAA
AGTCAGGCTC CCTTCACGGT GATCGACTCG GTGCTGTCGG AAGAGGCCGT GATGGGCTTC
GAGTACGGCT ATTCGTCGGC TGAGCCGAAC ACGCTGGTGA TCTGGGAAGC CCAGTTCGGT
GACTTCGCCA ACGGCGCACA GGTGGTGATC GACCAGTTCA TCTCGTCGGG CGAAGTGAAG
TGGGGCCGCG CCTCGGGTCT GACGCTGATG CTGCCGCACG GCTACGAAGG CCAAGGTCCG
GAGCACAGCT CGGCACGCCT GGAGCGCTAC CTGCAGCTCT GCGCAGACCA CAACATGCAA
GTGGTGCAGC CGACCACGCC GGCGCAAATC TTCCACCTGC TGCGTCGCCA GATGATCCGG
ATGTTCCGCA AGCCGCTGAT CATCCTGACG CCGAAGTCGC TGCTGCGCAG CAAGGACGCT
GTGTCGCCGT TGTCCGACCT GGCCAAGGGC CATTTCGAGA CGGTGATCGC CGATACGGCC
GAAGATCTGA ATGCCGCCAA GGTCAAGCGC GTCGTGGCCT GCTCGGGCAA GGTCTACTAC
GACTTGGTCA ACGCCCGTAA GGAACGCGGT CTGACCGACA CGGCCATCAT CCGCGTGGAA
CAGCTCTATC CGTTCCCGCA CAAGGCGTTC GCAGCCGAGC TGAAGAAGTA TCCGAACCTC
GCTGAAGTGG TGTGGTGCCA GGACGAGCCG CAGAACCAGG GCGCCTGGTT CTTCGTGCAG
CACTACATCC TCGAGAACAT GACCGAGGGT CAGAAGCTGG GCTACGCAGG CCGCCCGGCA
TCGGCATCGC CGGCCGTGGG CTACTACGCC AAACACAACG AGCAGCAAAA GGCGCTGATC
GATGCCGCGT TTGGCAAGCT CAAGGGCTTC GTGCTGAACA AGTAA
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| Protein sequence | MTELYKQYLD TSYLSGGNAA YVEDQYEAYL QDPTSVSEAL RAYFDALQNV PAVDGSNARD
IPHAPIVTSF AERAKHGPIR TIVASADSDM GRKRVAATQL VAAYRNVGLR WADLDPLKRQ
ERPPVPDLDP AFYGFTEADQ DIVFNASNTY FGKESMSLRE LVNNLRETYC GSIGAEFMYI
SDQAQKRWWQ ERLETIRSKP TFSAEKKKHI LERLTAAEGL ERFLHTKYVG QKRFSLEGGE
SFIAAMDELI QHSGAKGVQE IVIGMAHRGR LNVLVNTLGK MPADLFAEFE GKHVDDLPAG
DVKYHKGFSS DVTTPGGPVH LSLAFNPSHL EIVNPVVEGS VKARQERRDD KHGAQVLAVQ
VHGDAAFAGQ GVVMETLNLA QTRGYGTGGT IHIVINNQIG FTTSDPRDSR STLYCTDVVK
MIEAPVLHVN GDDPEAVVLA MQLAVDFRTE FQKDIAVDII CFRKLGHNEQ DTPAMTQPLM
YKKIGTHPGT RKLYADKLVT QNTLKAEEPD ALVQEFRAAM DAGKHTVDPV LSNFKNKFAV
DWLPFLNRKW TDAADTAVPM AELKRLAERI TAIPDHFKLH PLVENVVNNR AKMGKGEQAL
DWGMGEHLAF ASLVASGYPV RITGQDAGRG TFTHRHAVLH DQNRERWDAG SYIPLQNVSE
SQAPFTVIDS VLSEEAVMGF EYGYSSAEPN TLVIWEAQFG DFANGAQVVI DQFISSGEVK
WGRASGLTLM LPHGYEGQGP EHSSARLERY LQLCADHNMQ VVQPTTPAQI FHLLRRQMIR
MFRKPLIILT PKSLLRSKDA VSPLSDLAKG HFETVIADTA EDLNAAKVKR VVACSGKVYY
DLVNARKERG LTDTAIIRVE QLYPFPHKAF AAELKKYPNL AEVVWCQDEP QNQGAWFFVQ
HYILENMTEG QKLGYAGRPA SASPAVGYYA KHNEQQKALI DAAFGKLKGF VLNK
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