Gene Rpic_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1083 
Symbol 
ID6286140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1154548 
End bp1155405 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID642624656 
Productputative transmembrane protein 
Protein accessionYP_001898663 
Protein GI187928176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.677666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC TGATTCGCTC ATTTGGCCGC GCGCTGCTTT CGCAACTGCA TCCGCGCATG 
CTGTTCCTGA CGGTACTGCC TTTCGCCGTG GCCGTGGTGG TCTGGGGCGG GGTACTGTAT
TTCGGCTGGG ACGCCATGAA CGGCATGGCC CGCAACGCCG TGGAAGGCTG GGCCTTCATG
GGCTGGATCA AGAGCGGCCT GAACGCGATC GGTATGGCGG GGTTGTGGTC CGCGATCGCG
CCGCTGTTGG TGATCACCTT GCTCGTGCCG GTGATTGTCG TGTCGATCCT CGTGCTGGTG
AGCGTGGCGT CGGTGCCGGT GGTCATGCGC TATCTTGATC GCAGCTATCC GCAGCTTGAG
CGTCGCAAGG GTGGCTCGGT GCTGGGCAGT CTTACGCATG CTCTGCTATG CACGCTGGTG
GTCATTCTCA TGGCCATCGT CACGCTGCCA TTGTGGCTGA TTCCTCCGTT TTTCGCGCTG
ATTCCGCCGC TGCTGTGGGG TTGGCTCACG TACCGCTTGA TGACGTACGA TGCGCTGGCT
GATCACGCGA CTGCAGAAGA GCGCCGCGCG ATCATGCAGC GCTACCGGGT GCCGCTGCTA
GGCATCGGCG TCGCCGTTGG CATGCTGGGC TCGGCGCCGA CGCTGCTATG GGTGTCGTCG
GTGGTGACGA TTGTGCTGTT CCCGATCATC GCCATCGCCG TGATCTGGCT GTATGTGCTG
ATCTTTATTT TCTCGGCGCT GTGGTTTGGC CACTTCTGCT TGCGTGCGCT GACGCGTCTG
CGTGCTGAAG CGCCGCCTGC GCGCATGGTC GAGGCCAGCG TGATAGAAGT CACTACCATT
GAACTGCCTC GCGAATAA
 
Protein sequence
MNDLIRSFGR ALLSQLHPRM LFLTVLPFAV AVVVWGGVLY FGWDAMNGMA RNAVEGWAFM 
GWIKSGLNAI GMAGLWSAIA PLLVITLLVP VIVVSILVLV SVASVPVVMR YLDRSYPQLE
RRKGGSVLGS LTHALLCTLV VILMAIVTLP LWLIPPFFAL IPPLLWGWLT YRLMTYDALA
DHATAEERRA IMQRYRVPLL GIGVAVGMLG SAPTLLWVSS VVTIVLFPII AIAVIWLYVL
IFIFSALWFG HFCLRALTRL RAEAPPARMV EASVIEVTTI ELPRE