Gene Rpic_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1078 
Symbol 
ID6288594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1146066 
End bp1147463 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content65% 
IMG OID642624651 
ProductN-acetylglutamate synthase 
Protein accessionYP_001898658 
Protein GI187928171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase
[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID[TIGR01890] amino-acid N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTC GTTCCTCCGC CCCTGCCCCC GGCGTTTCCC TGGTGGCGCA CACGCCCGCC 
CCCGTCGATA TCGCTCCGAT CCCGCCCACG CCCGAACAGC AGCAGTTCGT GGACTGGCTG
CGCGAGGTGG CGCCGTACAT CCATTCCTTC CGCGACAAAA CCTTCGTGAT CGGCTTTGGC
GGCGAATTGG TCCAGGCCGG CATGCTGGGC GCGCTCGTCA ACGATGTCGC CCTGTTGCAC
GCCATGGGCA TGCGCATCGT GCTGGTGCAT GGCTCGCGCC CGCAGGTGGA AGAACAGCTC
GCCCTGCGCA ACGTGAAAAC CACGTTCGTG GATGGCGTAC GCGTGACGGA CGGCGCTGCG
CTGGAATCCG CCAAGGAAGC CTCCGGCGAA CTGCGCCTGG ATATCGAAGC CGCCTTCAGC
CAGGGCCTGC CCAACACGCC GATGGCAGGC GCGCGCATGT CGGTCGTATC CGGCAACTTC
GTAACGGCGC GGCCGGTGGG CATCGTCAAC GGCGTGGACT TCCAGCACAC GGGGCTGGTG
CGCAAGATCG ACGCGGAATC GATCCAGCAC TCACTGTCCA ACCGCAAGAT CGTGCTGCTC
TCGCCGCTGG GCTTCTCGCC CACGGGCCAG GCGTTCAACC TTTCGATGGA AGACGTGGCC
GCCAACACCG CCACGGCGCT CAAGGCCGAC AAGCTCATCT TCATCACGGA GCTGCCCGGC
ATCATGGACC GCGTGGGCAA GCTGCAACAG GATCTGTCGA TGGAAACGGC CATCGAACGC
CTGCGCGACG GCAGCCTGTC GCACGACACG GCGTACTACC TGCAGCACAT CGTCAAGGCG
ATGCGTGGTG GCGTGCGCCG TGCACATGTC ATTCCGTTCG CGCTGGACGG CAGCATCCTG
CTGGAGCTGT TCCTGCACGA CGGCGTGGGC ACCATGGTGT CGCACACCGA TCTGGAATAC
CTGCGCGATG CCACGCTGGA TGACGTGGGC GGCATCGTCT CGCTCATCGA ACCGCTCGAA
GCTGACGGCA CGCTGGTGCC GCGCGAACGC CGGCTGCTGG AGCGCGACAT CGCCAACTTC
TCGGTCATCG AGCACGACGG CATCATCTTT GGCTGCGTGG CGCTGTATCC GTACCCGAAG
GACGGCATGG CCGAAATGGC TTGCCTAATC GTCTCCCCCG ACAGCCAAGG CACCGGCGAC
GGCGAACGCC TGCTCAAGCA CACCGAAGTG CGCGCCCGAG CGCTGGGCCT CAAGCGCCTG
TTTGTGCTCA CCACGCGGAC GGAACACTGG TTCCTCAAGC GCGGCTTCGT ACGTGCCAGC
GTGGACGATC TGCCGGAAGA CCGCCGCAAG CTGTACAACT GGCAGCGGCG CTCGATGGTG
CTGATGAAGA AGCTCTAA
 
Protein sequence
MTARSSAPAP GVSLVAHTPA PVDIAPIPPT PEQQQFVDWL REVAPYIHSF RDKTFVIGFG 
GELVQAGMLG ALVNDVALLH AMGMRIVLVH GSRPQVEEQL ALRNVKTTFV DGVRVTDGAA
LESAKEASGE LRLDIEAAFS QGLPNTPMAG ARMSVVSGNF VTARPVGIVN GVDFQHTGLV
RKIDAESIQH SLSNRKIVLL SPLGFSPTGQ AFNLSMEDVA ANTATALKAD KLIFITELPG
IMDRVGKLQQ DLSMETAIER LRDGSLSHDT AYYLQHIVKA MRGGVRRAHV IPFALDGSIL
LELFLHDGVG TMVSHTDLEY LRDATLDDVG GIVSLIEPLE ADGTLVPRER RLLERDIANF
SVIEHDGIIF GCVALYPYPK DGMAEMACLI VSPDSQGTGD GERLLKHTEV RARALGLKRL
FVLTTRTEHW FLKRGFVRAS VDDLPEDRRK LYNWQRRSMV LMKKL