Gene Rpic_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1070 
Symbol 
ID6289436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1137042 
End bp1138382 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content62% 
IMG OID642624642 
Productadenylosuccinate synthetase 
Protein accessionYP_001898650 
Protein GI187928163 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.763716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC CAGCAGTGAG CCAAGGACGC AATGTCGTCG TCATCGGCAC CCAATGGGGT 
GACGAAGGTA AAGGGAAAAT CGTCGATTGG CTGACCGATC ATGCGCAAGG CGTGGTTCGT
TTCCAGGGCG GACATAACGC AGGCCATACC CTCATCATCG GCGGTAAGAA GACGATTCTG
CGTCTGATCC CGTCGGGCAT CATGCGTGAC GGCGTCGCGT GTTACATCGG CAACGGTGTT
GTGCTGTCGC CTGAGGCGCT GTTCAAGGAA ATCGACGAGC TTGAATCCGC CGGTGTGCAG
GTGCAGAACC GACTGCGCAT TTCGGAAGCG ACCAACCTGA TCCTGCCGTA CCACGTGGCC
ATCGACAAGG CGCGCGAAGC CAAGCGCGGC GCCGCCAAGA TCGGCACCAC CGGTCGCGGT
ATCGGCCCGG CGTACGAAGA CAAGGTGGCC CGCCGCGGGC TGCGCGTGCA GGACCTGTTC
GACCCGGCTT ACTTTGCCGA GCGTCTGCGC GAGAACCTGG ATTTCCACAA CTTTGTTCTG
ACGCAGTACC TGAATCATCC GGCGCTGGAC TTCCAGCAAA CGCTGGACGA GATGCTGTCC
TACGCCGGCC GCCTCGCCCC GATGGTGACG GACGTGTCGG CTGAACTGTT CGCTGCCAAC
GCCGCCGGTA AGAACCTGAT GTTCGAGGGC GCGCAAGGTA CGCTGCTCGA TATCGACCAC
GGCACCTATC CGTTCGTCAC GTCGAGCAAC TGCGTGGCGG GTAATGCCGC CGCGGGCGCG
GGTGTCGGCC CGGGCCAACT GCATTACATC CTTGGCATCA CCAAGGCGTA TTGCACGCGC
GTGGGTTCCG GCCCGTTCCC GAGCGAACTG TATGACGCGG ACAACCCCGC GCGCCAAGAT
CCGATTGGCG TGCGTCTGGC CAATGTCGGC AAGGAATTCG GCTCGGTCAC CGGCCGGCCG
CGCCGCACGG GCTGGTTGGA TGCTGCCGCG CTGCGCCGAG CGATCCAGAT CAACGGTGTG
TCGGGCCTGT GCATGACCAA GCTCGATGTG CTGGATGGCC TGGAAACCCT CAAGCTGTGC
GTTGGCTACA TGCTCGATGG CAAGCAAATT GACATCTTGC CGCGTGGCTC CGATGCCGTG
GCGCGTTGCC AGCCGATCTA CGAAGAATTC CCGGGTTGGA ACACCTCGAC CTTCGGTTTG
AAGGAGTGGG ATGCGCTGCC CCAGACCGCT CAGGCTTACC TGAAGCGCGT CGAAGAAGTG
GCCGGTATTC CGATTGCCAT GATTTCGACC GGTCCTGACC GGGACGAGAC CATCCTGCTG
CGTCATCCCT ACAAGGACTG A
 
Protein sequence
MSAPAVSQGR NVVVIGTQWG DEGKGKIVDW LTDHAQGVVR FQGGHNAGHT LIIGGKKTIL 
RLIPSGIMRD GVACYIGNGV VLSPEALFKE IDELESAGVQ VQNRLRISEA TNLILPYHVA
IDKAREAKRG AAKIGTTGRG IGPAYEDKVA RRGLRVQDLF DPAYFAERLR ENLDFHNFVL
TQYLNHPALD FQQTLDEMLS YAGRLAPMVT DVSAELFAAN AAGKNLMFEG AQGTLLDIDH
GTYPFVTSSN CVAGNAAAGA GVGPGQLHYI LGITKAYCTR VGSGPFPSEL YDADNPARQD
PIGVRLANVG KEFGSVTGRP RRTGWLDAAA LRRAIQINGV SGLCMTKLDV LDGLETLKLC
VGYMLDGKQI DILPRGSDAV ARCQPIYEEF PGWNTSTFGL KEWDALPQTA QAYLKRVEEV
AGIPIAMIST GPDRDETILL RHPYKD