Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1066 |
Symbol | |
ID | 6286109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1133087 |
End bp | 1134520 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642624638 |
Product | HflK protein |
Protein accession | YP_001898646 |
Protein GI | 187928159 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.544735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCT ACTTCTTCGC AGTCAGACAA TCAGGACAAG CCCGACCGCT CATGCCCGAG ATTTCGACCC AGTCTTCTTC CATGGCCTCG CCGCGTCCGG CGCGAGGTTT GTGGCACCGC TTGCGTGTGC TGCTTTCGCT GAACGATCCG CGCTGGGGTC GCGGCGATGA CAACAACAAC GCCGAGCGCG AAGGCAACAA AGACGAACCA AAGCGTCAAA GCAAACCGCC TCAGGATGGC CCCCCCGACC TTGACGAGTT GTGGCGCGAC TTCAATCGCC GCCTGAACAA CCTGTTCGGC CGCAAGGACA GCGGTAACGG TAGCGACGGC CCCACGCCGC TGCGTCCCGG TAACGGCCGT GGCGGCTCGG GCCTGGGCAT CGGCGTGCTG CTGGCGGTGC TCGTTGGCCT GTGGCTAGCC AGCGGTTTCT TTATCGTGCA GGAAGGCCAG ACGGGCGTGA TCCTGCAGTT CGGCCGTTTC AAGTACCTGG CAACGCCGGG TATTAACTGG CGTCTGCCGT ATCCGGTCGA ATCGCACGAA ATCGTGAACC TGTCGGGTGT GCGCACGCTT GAAATCGGTC GGACTACCCA GATCAAGGAC ACGAACCTGA AAGATTCCTC GATGCTCACG CAGGACGAGA ACATCGTCGA CGTGCGCTTC TCGGTCCAGT ACAACATTGC CAATCCCGTC GACTACCTGT TCTACAACCG TACGGACCGT GGCGGCGATG AAGAACTGGT GACGCAGGCG GCCGAGACGT CGGTGCGCGA GATCGTCGGT CGCAACAAGA TGGATGCGGT TCTGTACGAA GGTCGTGATG CTGTGGGCCG TAATCTCGCG GAATCGATTC AACGCATCTT GTCGGCGTAC AAGACCGGGA TTCGAATCCT CAGCGTGAAC GTGCAGAGCG TGCAGCCGCC CGAGCAGGTG CAGGCCGCGT TCGATGACGT GACCAAGGCT GGCCAGGACC GCGAGCGTGC CATTTCTGAA GGTCAGGCTT ACGCCAATGA CGTGGTGCCG CGCGCCAAGG GCACGGCCGC GCGTCTGGGC GAAGAGGCCC AAGGCTACAA GGCACGCGTC ACTGCGCGTG CGGAAGGTGA TGCGGCGCGC TTTGCGTCGG TGCAACGTGA GTACGCGAAA GCGCCGCAGG TCACGCGCGA CCGTATCTAT CTGGAAACCA TGCAAGACAT TTACGCCAAT TCGACGAAAG TCTTGGTCGA CCAGAGCAAT GGCAGCCTCT TGTATTTGCC GCTGGACAAG CTGATCGCGC AAACGCAGGG CGACACATCG CGCCCGGCTC CCGCGCCGGG TGCTTCTGCG CAGGACAGCG GTTCTGCGCA GGGCGTGCCC ACTCCCTCCA ATCCGTCACC GGCCAATGAC GCAGATTCGC GCTCGCGCGA AGCGCTGCGC AACCGTGACC GCGATTCGCG CTAA
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Protein sequence | MARYFFAVRQ SGQARPLMPE ISTQSSSMAS PRPARGLWHR LRVLLSLNDP RWGRGDDNNN AEREGNKDEP KRQSKPPQDG PPDLDELWRD FNRRLNNLFG RKDSGNGSDG PTPLRPGNGR GGSGLGIGVL LAVLVGLWLA SGFFIVQEGQ TGVILQFGRF KYLATPGINW RLPYPVESHE IVNLSGVRTL EIGRTTQIKD TNLKDSSMLT QDENIVDVRF SVQYNIANPV DYLFYNRTDR GGDEELVTQA AETSVREIVG RNKMDAVLYE GRDAVGRNLA ESIQRILSAY KTGIRILSVN VQSVQPPEQV QAAFDDVTKA GQDRERAISE GQAYANDVVP RAKGTAARLG EEAQGYKARV TARAEGDAAR FASVQREYAK APQVTRDRIY LETMQDIYAN STKVLVDQSN GSLLYLPLDK LIAQTQGDTS RPAPAPGASA QDSGSAQGVP TPSNPSPAND ADSRSREALR NRDRDSR
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