Gene Rpic_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1066 
Symbol 
ID6286109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1133087 
End bp1134520 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content62% 
IMG OID642624638 
ProductHflK protein 
Protein accessionYP_001898646 
Protein GI187928159 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.544735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCT ACTTCTTCGC AGTCAGACAA TCAGGACAAG CCCGACCGCT CATGCCCGAG 
ATTTCGACCC AGTCTTCTTC CATGGCCTCG CCGCGTCCGG CGCGAGGTTT GTGGCACCGC
TTGCGTGTGC TGCTTTCGCT GAACGATCCG CGCTGGGGTC GCGGCGATGA CAACAACAAC
GCCGAGCGCG AAGGCAACAA AGACGAACCA AAGCGTCAAA GCAAACCGCC TCAGGATGGC
CCCCCCGACC TTGACGAGTT GTGGCGCGAC TTCAATCGCC GCCTGAACAA CCTGTTCGGC
CGCAAGGACA GCGGTAACGG TAGCGACGGC CCCACGCCGC TGCGTCCCGG TAACGGCCGT
GGCGGCTCGG GCCTGGGCAT CGGCGTGCTG CTGGCGGTGC TCGTTGGCCT GTGGCTAGCC
AGCGGTTTCT TTATCGTGCA GGAAGGCCAG ACGGGCGTGA TCCTGCAGTT CGGCCGTTTC
AAGTACCTGG CAACGCCGGG TATTAACTGG CGTCTGCCGT ATCCGGTCGA ATCGCACGAA
ATCGTGAACC TGTCGGGTGT GCGCACGCTT GAAATCGGTC GGACTACCCA GATCAAGGAC
ACGAACCTGA AAGATTCCTC GATGCTCACG CAGGACGAGA ACATCGTCGA CGTGCGCTTC
TCGGTCCAGT ACAACATTGC CAATCCCGTC GACTACCTGT TCTACAACCG TACGGACCGT
GGCGGCGATG AAGAACTGGT GACGCAGGCG GCCGAGACGT CGGTGCGCGA GATCGTCGGT
CGCAACAAGA TGGATGCGGT TCTGTACGAA GGTCGTGATG CTGTGGGCCG TAATCTCGCG
GAATCGATTC AACGCATCTT GTCGGCGTAC AAGACCGGGA TTCGAATCCT CAGCGTGAAC
GTGCAGAGCG TGCAGCCGCC CGAGCAGGTG CAGGCCGCGT TCGATGACGT GACCAAGGCT
GGCCAGGACC GCGAGCGTGC CATTTCTGAA GGTCAGGCTT ACGCCAATGA CGTGGTGCCG
CGCGCCAAGG GCACGGCCGC GCGTCTGGGC GAAGAGGCCC AAGGCTACAA GGCACGCGTC
ACTGCGCGTG CGGAAGGTGA TGCGGCGCGC TTTGCGTCGG TGCAACGTGA GTACGCGAAA
GCGCCGCAGG TCACGCGCGA CCGTATCTAT CTGGAAACCA TGCAAGACAT TTACGCCAAT
TCGACGAAAG TCTTGGTCGA CCAGAGCAAT GGCAGCCTCT TGTATTTGCC GCTGGACAAG
CTGATCGCGC AAACGCAGGG CGACACATCG CGCCCGGCTC CCGCGCCGGG TGCTTCTGCG
CAGGACAGCG GTTCTGCGCA GGGCGTGCCC ACTCCCTCCA ATCCGTCACC GGCCAATGAC
GCAGATTCGC GCTCGCGCGA AGCGCTGCGC AACCGTGACC GCGATTCGCG CTAA
 
Protein sequence
MARYFFAVRQ SGQARPLMPE ISTQSSSMAS PRPARGLWHR LRVLLSLNDP RWGRGDDNNN 
AEREGNKDEP KRQSKPPQDG PPDLDELWRD FNRRLNNLFG RKDSGNGSDG PTPLRPGNGR
GGSGLGIGVL LAVLVGLWLA SGFFIVQEGQ TGVILQFGRF KYLATPGINW RLPYPVESHE
IVNLSGVRTL EIGRTTQIKD TNLKDSSMLT QDENIVDVRF SVQYNIANPV DYLFYNRTDR
GGDEELVTQA AETSVREIVG RNKMDAVLYE GRDAVGRNLA ESIQRILSAY KTGIRILSVN
VQSVQPPEQV QAAFDDVTKA GQDRERAISE GQAYANDVVP RAKGTAARLG EEAQGYKARV
TARAEGDAAR FASVQREYAK APQVTRDRIY LETMQDIYAN STKVLVDQSN GSLLYLPLDK
LIAQTQGDTS RPAPAPGASA QDSGSAQGVP TPSNPSPAND ADSRSREALR NRDRDSR