Gene Rpic_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1056 
Symbol 
ID6286055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1121969 
End bp1123120 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID642624628 
Productradical SAM enzyme, Cfr family 
Protein accessionYP_001898636 
Protein GI187928149 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0486076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG TGGTGAATCT CCTCGATTTC GACGCACAGG GTCTTCTCGC GTACTGCGAG 
AGCCTGGGTG AGAAGTCGTT CCGCGCCAAG CAATTGCAGC GCTGGATTCA CCAGTCGGGT
GCGTCCGAGT TTGGCGAGAT GACGGATCTC GCCAAGTCGC TGCGCGAAAA GCTCGCGACC
CGCGCCAACA TCCAGGCGCC GGCGGTCATT TCCGATCACC TTTCGTCGGA CGGCACACGC
AAGTGGCTGG TCGACGTTGG GCAGGGCAAT GCCGTCGAGA CGGTCTACAT CCCCGAAGAG
ACGCGCGGCA CTCTATGTGT GTCGTCTCAG GCGGGGTGTG CCGTCAACTG CCGGTTCTGT
TCGACCGGCA AGCAAGGTTT CTCGCGCAAT CTCAGCACTG GCGAGATCAT CGGCCAGCTC
TGGATGGCCG AATTCGCCAT GCGTAAGCAG CTTGGCCGTG GCCCCAAGGA CGACCGCGTT
ATCACCAACG TGGTGATGAT GGGCATGGGT GAGCCGCTGC TGAACTACGA CGCTGTGGTG
CCGGCTCTGG CCCTGATGCT TGACGACAAC GCGTATGGCC TTTCGCGCCG GCGCGTAACG
GTATCCACGT CCGGCGTGGT TCCGATGATG GACCGCCTTG CGCGGGATGT GCCGGTGGCG
CTTGCTGTGT CGCTGCATGC GTCCAACGAT GCGCTGCGCG ACGTGCTCGT GCCGCTCAAC
AAGAAGTACC CGCTGGCCGA ACTGATGGCT GCCTGCCGCC GCTATCTCGA GTTTGCCCCG
CGTGATTTCA TCACCTTTGA ATACTGCATG CTCGACGGCG TCAACGACAC CGTCGAGCAT
GCCCGTGAAC TGCTGCGCGT CGTGGCCGAC GTGCCGTGCA AGTTCAACCT GATCCCATTC
AACCCGTTCC CGGAATCGGG CTTGAAGCGC TCGAACAATG AGCAGATCCG CCGCTTCTCG
CAAGTGCTGC TGGATGCCGG CATCGTCACC ACCATCCGCA AGACGCGGGG CGACGACATC
GATGCGGCCT GCGGCCAGCT CGCTGGCGAG GTCAAGGACC GCACGCGCTT GGCCGAGCGC
GGCAAGTTCG GCAAGATCGT CGAGATCCCC GTGGTCGGGG CCGACTCAAC TCACCGCATG
GGTACCGCAT GA
 
Protein sequence
MSDVVNLLDF DAQGLLAYCE SLGEKSFRAK QLQRWIHQSG ASEFGEMTDL AKSLREKLAT 
RANIQAPAVI SDHLSSDGTR KWLVDVGQGN AVETVYIPEE TRGTLCVSSQ AGCAVNCRFC
STGKQGFSRN LSTGEIIGQL WMAEFAMRKQ LGRGPKDDRV ITNVVMMGMG EPLLNYDAVV
PALALMLDDN AYGLSRRRVT VSTSGVVPMM DRLARDVPVA LAVSLHASND ALRDVLVPLN
KKYPLAELMA ACRRYLEFAP RDFITFEYCM LDGVNDTVEH ARELLRVVAD VPCKFNLIPF
NPFPESGLKR SNNEQIRRFS QVLLDAGIVT TIRKTRGDDI DAACGQLAGE VKDRTRLAER
GKFGKIVEIP VVGADSTHRM GTA