Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1050 |
Symbol | |
ID | 6289096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1115958 |
End bp | 1116785 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642624622 |
Product | Peptidase M23 |
Protein accession | YP_001898630 |
Protein GI | 187928143 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.515696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATTT CCCGGAGCTC CATGAACCGT CCAAGCCCCG CACGCGCAGG CCGGCTCGCC GTGGCGATGG TGTCGGCCGC ACTACTGGCG GCTTGCGCAT CCTCCGGCAA CCAGGCCCCT GTTCTCGACC GCACCTCGCG TGCAGGCAAC GCTGGCACCG TGTCGCAAGA GCCGCCGCCC CCCGGCTACT ATCGTGTCAA GCGTGGCGAT ACCTTGTACA GCATCGCATT GCGTAACGGC CAGGCGCCGC GAGACCTGGT AGCCTGGAAC AATATCGCCA ACCCGAACCA GATCGAAGTC GATCAGTTGT TGCGCGTTGT ACCGCCGAAC GCGGATGTCA GCAGCACTGG GGCCGTCGTT ACGCCGGTTC GCCCGACCAA TACAACTACG CAGCCAGTCG ATTCCATCGC GGTCACGCCG CCGCCCACTG CGTCGTCCAG CGCTCCTGCC GGGGCAAGCG ACAGTGCAAT CTCGCTGGGC TGGCCGGCAC GCGGCTCACT CATCAACCGT TTCGATGACA AGAGCAACAA GGGCATCGAC ATTGGCGGCA AACGTGGCGA CGCGGTGGTT GCTGCTGACG ACGGAAAAGT GATCCACGTT GGACCCTTGC GTGGGTACGG GAATCTTGTC ATCATCAAAC ACAACGACAC GTTCCTGACC GCCTACGGCA ACAACGACAA GGTTCTGGTC ACCGAGCAAT CCACGGTCAA GAAAGGGCAG AAGATCGCCG AAATGGGCAG TACCGATGCG GATCGCGTGA AGCTTCATTT TGAAGTGCGC CGCAACGGTA AGCCGGTCGA TCCGATGCGC TACTTGCCGC CTCAATAG
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Protein sequence | MFISRSSMNR PSPARAGRLA VAMVSAALLA ACASSGNQAP VLDRTSRAGN AGTVSQEPPP PGYYRVKRGD TLYSIALRNG QAPRDLVAWN NIANPNQIEV DQLLRVVPPN ADVSSTGAVV TPVRPTNTTT QPVDSIAVTP PPTASSSAPA GASDSAISLG WPARGSLINR FDDKSNKGID IGGKRGDAVV AADDGKVIHV GPLRGYGNLV IIKHNDTFLT AYGNNDKVLV TEQSTVKKGQ KIAEMGSTDA DRVKLHFEVR RNGKPVDPMR YLPPQ
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