Gene Rpic_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1050 
Symbol 
ID6289096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1115958 
End bp1116785 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID642624622 
ProductPeptidase M23 
Protein accessionYP_001898630 
Protein GI187928143 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.515696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATTT CCCGGAGCTC CATGAACCGT CCAAGCCCCG CACGCGCAGG CCGGCTCGCC 
GTGGCGATGG TGTCGGCCGC ACTACTGGCG GCTTGCGCAT CCTCCGGCAA CCAGGCCCCT
GTTCTCGACC GCACCTCGCG TGCAGGCAAC GCTGGCACCG TGTCGCAAGA GCCGCCGCCC
CCCGGCTACT ATCGTGTCAA GCGTGGCGAT ACCTTGTACA GCATCGCATT GCGTAACGGC
CAGGCGCCGC GAGACCTGGT AGCCTGGAAC AATATCGCCA ACCCGAACCA GATCGAAGTC
GATCAGTTGT TGCGCGTTGT ACCGCCGAAC GCGGATGTCA GCAGCACTGG GGCCGTCGTT
ACGCCGGTTC GCCCGACCAA TACAACTACG CAGCCAGTCG ATTCCATCGC GGTCACGCCG
CCGCCCACTG CGTCGTCCAG CGCTCCTGCC GGGGCAAGCG ACAGTGCAAT CTCGCTGGGC
TGGCCGGCAC GCGGCTCACT CATCAACCGT TTCGATGACA AGAGCAACAA GGGCATCGAC
ATTGGCGGCA AACGTGGCGA CGCGGTGGTT GCTGCTGACG ACGGAAAAGT GATCCACGTT
GGACCCTTGC GTGGGTACGG GAATCTTGTC ATCATCAAAC ACAACGACAC GTTCCTGACC
GCCTACGGCA ACAACGACAA GGTTCTGGTC ACCGAGCAAT CCACGGTCAA GAAAGGGCAG
AAGATCGCCG AAATGGGCAG TACCGATGCG GATCGCGTGA AGCTTCATTT TGAAGTGCGC
CGCAACGGTA AGCCGGTCGA TCCGATGCGC TACTTGCCGC CTCAATAG
 
Protein sequence
MFISRSSMNR PSPARAGRLA VAMVSAALLA ACASSGNQAP VLDRTSRAGN AGTVSQEPPP 
PGYYRVKRGD TLYSIALRNG QAPRDLVAWN NIANPNQIEV DQLLRVVPPN ADVSSTGAVV
TPVRPTNTTT QPVDSIAVTP PPTASSSAPA GASDSAISLG WPARGSLINR FDDKSNKGID
IGGKRGDAVV AADDGKVIHV GPLRGYGNLV IIKHNDTFLT AYGNNDKVLV TEQSTVKKGQ
KIAEMGSTDA DRVKLHFEVR RNGKPVDPMR YLPPQ