| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1047 |
|---|
| Symbol | |
|---|
| ID | 6287517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1113055 |
|---|
| End bp | 1114029 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624619 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_001898627 |
|---|
| Protein GI | 187928140 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.510115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG TCGTCTGCAA GACCTGGGGC CCGCCCGAGT CGCTGGTGAT CGAAACGCTG
CCGGACCTCT CGCCGGGTGC TGGCGAAGTC GTGATCGACG TGAAGGCTGC GGGGGTGAAT
TTTCCTGACG TGCTGATCAT CCAGAATAAG TACCAGTTCA AGCCGGAGCT GCCGTTTACC
CCCGGCTCGG AAGTCGCGGG CGTGGTCAAT GCAGTAGGCG AAGGCGTGTC GCACCTCAAG
GCCGGCGACC ACGTGATCGC CTTTCTTGGC CAGGGCGCGT TTGCTTCACA GGTGAAGGCA
TCGGCCAAGG TGGTGATGCC GATGCCGCCG GGCATGGCGT TCGACACCGC TGCGGCATTC
ACGCTCACGT ATGGTACGTC GCACCACGCG GTGGTCGATC GCGGGCAACT GAAGGCTGGT
GAGACGATGC TGGTGCTGGG CGCTGCGGGC GGCGTCGGGC TGGCGGCCAT CGAGATCGGC
AAGGCGATCG GCGCACGCGT GATCGCCGCA GCATCGAGCG ACGAGAAGCT GGCGGTCTGC
AAGGACCACG GCGCTGATGC GCTCATCAAC TATTCGACCG AAGACCTGCG CGAGTGCATC
AAGGAATTGA CCGACGGCAA GGGCCCGGAC GTGATCTATG ACCCGGTCGG CGGCATCTAT
GCGGAACCGG CGTTCCGTTC AATTGCCTGG CGTGGCCGCT ACCTCGTTGT CGGATTTGCC
AATGGCGAGA TCCCCAAGAT GCCGCTGAAC CTGGCACTGC TGAAAGGCGC ATCGCTGGTT
GGGGTGTTCT GGGGCGAATT CGCTCGCCGC GAGCCGAAGG CGAATCTGGC GAACATGATG
CAGATGCTCG GCTGGATGCA GGAAGGCAAG ATCCGCCCGC ATATCTCGGC GCGCTATCCG
CTGGAGCAGA CGACACAAGC GCTGCTGGAC ATGGCCGCAC GCAAGGTGAC GGGCAAGGTG
GTGATCCAGC CTTAA
|
|---|
| Protein sequence | MKAVVCKTWG PPESLVIETL PDLSPGAGEV VIDVKAAGVN FPDVLIIQNK YQFKPELPFT
PGSEVAGVVN AVGEGVSHLK AGDHVIAFLG QGAFASQVKA SAKVVMPMPP GMAFDTAAAF
TLTYGTSHHA VVDRGQLKAG ETMLVLGAAG GVGLAAIEIG KAIGARVIAA ASSDEKLAVC
KDHGADALIN YSTEDLRECI KELTDGKGPD VIYDPVGGIY AEPAFRSIAW RGRYLVVGFA
NGEIPKMPLN LALLKGASLV GVFWGEFARR EPKANLANMM QMLGWMQEGK IRPHISARYP
LEQTTQALLD MAARKVTGKV VIQP
|
|---|
| |