Gene Rpic_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1043 
Symbol 
ID6289580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1109429 
End bp1110241 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID642624615 
ProductABC transporter related 
Protein accessionYP_001898623 
Protein GI187928136 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATC CCGCGCTTTC GTTCGATCAG ATCACCTGCA CGTTCATCTC GCCCGACACG 
CCGGGCCAGC GTTACACCGC TGTGCAAAAC ACCTCGCTGG AGGTGCATGC CGGCGAGTTC
GTTTCGGTGG TGGGCCCGAC GGGTTGCGGC AAATCCACGT TGCTGAATCT GGCGGCCGGC
CTGTTGCAGC CGTCTTCCGG GCAGGTGCGG GTGTTTGGCG AGCCGCTGGT CGGTATCAAC
CGTCGCGCCG GCTACATGTT CCAGGCCGAG GCGCTGATGC CATGGCGCAG CGCGCTCGAC
AACGTGATGG CCGGGCTGGA GTTTCGAGGC ATGCCCGACA AGGAGGCGCG TGATTTGGCG
ATGTCCTGGC TTGCGCGCGT GGGTTTGGCC GGCTTTGAAG ACCGCTACCC GCATCAACTC
TCCGGCGGCA TGCGCAAGCG TGTAAGCCTG GCGCAAACGC TGGTGCTCGA CCCCGACATC
ATCCTCATGG ACGAGCCGTT TTCCGCGCTC GATATTCAGA CGCGCCAGTT GATGGAAAAC
GAGGTGCTCG ATCTCTGGGC CGCCAAGCGT AAGGCGGTGC TGTTTATCAC GCACGATCTG
GACGAAGCGA TTGCCATGAG CGACCGCGTG GTCGTTCTGG CTGCCGGCCC CGGCACGCAC
CCGATCGGCG AATTCACCAT CGACCTTCCG CGCCCGCGCG ATGTGGCAGA GATTCGCGAT
CAGGCCGGCT TCGTCGACCT GCACTCGCGC ATCTGGGATG TCCTGCGCGA AGAAGTGCTC
AAGGGCTATG CGCAGCACCG CCGCGTGGCT TGA
 
Protein sequence
MSHPALSFDQ ITCTFISPDT PGQRYTAVQN TSLEVHAGEF VSVVGPTGCG KSTLLNLAAG 
LLQPSSGQVR VFGEPLVGIN RRAGYMFQAE ALMPWRSALD NVMAGLEFRG MPDKEARDLA
MSWLARVGLA GFEDRYPHQL SGGMRKRVSL AQTLVLDPDI ILMDEPFSAL DIQTRQLMEN
EVLDLWAAKR KAVLFITHDL DEAIAMSDRV VVLAAGPGTH PIGEFTIDLP RPRDVAEIRD
QAGFVDLHSR IWDVLREEVL KGYAQHRRVA