Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1043 |
Symbol | |
ID | 6289580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1109429 |
End bp | 1110241 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624615 |
Product | ABC transporter related |
Protein accession | YP_001898623 |
Protein GI | 187928136 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCATC CCGCGCTTTC GTTCGATCAG ATCACCTGCA CGTTCATCTC GCCCGACACG CCGGGCCAGC GTTACACCGC TGTGCAAAAC ACCTCGCTGG AGGTGCATGC CGGCGAGTTC GTTTCGGTGG TGGGCCCGAC GGGTTGCGGC AAATCCACGT TGCTGAATCT GGCGGCCGGC CTGTTGCAGC CGTCTTCCGG GCAGGTGCGG GTGTTTGGCG AGCCGCTGGT CGGTATCAAC CGTCGCGCCG GCTACATGTT CCAGGCCGAG GCGCTGATGC CATGGCGCAG CGCGCTCGAC AACGTGATGG CCGGGCTGGA GTTTCGAGGC ATGCCCGACA AGGAGGCGCG TGATTTGGCG ATGTCCTGGC TTGCGCGCGT GGGTTTGGCC GGCTTTGAAG ACCGCTACCC GCATCAACTC TCCGGCGGCA TGCGCAAGCG TGTAAGCCTG GCGCAAACGC TGGTGCTCGA CCCCGACATC ATCCTCATGG ACGAGCCGTT TTCCGCGCTC GATATTCAGA CGCGCCAGTT GATGGAAAAC GAGGTGCTCG ATCTCTGGGC CGCCAAGCGT AAGGCGGTGC TGTTTATCAC GCACGATCTG GACGAAGCGA TTGCCATGAG CGACCGCGTG GTCGTTCTGG CTGCCGGCCC CGGCACGCAC CCGATCGGCG AATTCACCAT CGACCTTCCG CGCCCGCGCG ATGTGGCAGA GATTCGCGAT CAGGCCGGCT TCGTCGACCT GCACTCGCGC ATCTGGGATG TCCTGCGCGA AGAAGTGCTC AAGGGCTATG CGCAGCACCG CCGCGTGGCT TGA
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Protein sequence | MSHPALSFDQ ITCTFISPDT PGQRYTAVQN TSLEVHAGEF VSVVGPTGCG KSTLLNLAAG LLQPSSGQVR VFGEPLVGIN RRAGYMFQAE ALMPWRSALD NVMAGLEFRG MPDKEARDLA MSWLARVGLA GFEDRYPHQL SGGMRKRVSL AQTLVLDPDI ILMDEPFSAL DIQTRQLMEN EVLDLWAAKR KAVLFITHDL DEAIAMSDRV VVLAAGPGTH PIGEFTIDLP RPRDVAEIRD QAGFVDLHSR IWDVLREEVL KGYAQHRRVA
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