| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1024 |
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| Symbol | |
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| ID | 6286510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1084890 |
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| End bp | 1086680 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624596 |
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| Product | putative inner membrane transmembrane protein |
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| Protein accession | YP_001898604 |
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| Protein GI | 187928117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.18489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.362431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA CCCGCGTCTC GCGCATCCGC CTGACTGCCG CCGCCACCCG CGAGTTGCCG
CGTTGGCTGC TGCTCGCCAT CTGCGTGATC TACGGCCTAT CAGGGCTGTT CTCGCGCGAC
CCGTGGAAGA ACGAAGACGC CGCCGGCTTC GGCGCGATGT GGACACTGGC CACCGGCAAT
GCGCAGGACT GGCTGATGCC GAACATCGTC GGGCGCCCCG TCGTGCAATC TGGGCCACTG
GTGTTCTGGA TCGGTGGCGC GTTCATTCGC CTCTTCGGAC AATGGCTCGG CCCCGCGGAC
GCGTCTCGCC TGGCCACCGC CCTCTTCTTC TTCGTTACCA GCGCTTGCAT CTGGTACGGG
GCCTATCTGC TGGGTCGGCG CCCAGAAGTC CAACCGTTTG AGTTCGTCTT TGGCGGCCAG
CCAAACACGC GCGACTACGG CCGTACGCTG GCAGATGGAG CACTGCTGAT CTTCCTCGCC
TGCGTGGGCC TGGCACAGCG CGGTCACGAA ACGACACCGC TGGTCGGGGC GCTGTGCTTC
GTGGCTGTCG CGGTGTATGG CTTGATCCGA GCGCTCGACA AGCCGGTGCA CGGCAGCCTC
ATCTACGGCA TCGGCATCGG CTGCCTGTCG CTGGCGGGCG GGCCAATCCT GCCATTGGCC
ATCACGGTGG CCGTATTGAT GGCCGCGCAT GCCACGCGCG TACTGCCGCT GCGACCCCTG
CTGACAGTGG CGCTGCCCGT GTCGCTCATA CTCGGCTGCT CATGGCCGGT GATGACGTAC
TTGCTGGCAA ACAATCCGAC GGACGCCGTG ACCTACGTCC GCGAATGGGC GCGCTTCGAT
CGCCATCAAT ACGCCGGCCC CACGGCGCAT TCGCTTGGCT TTGTCGCACG CAACCTGCCA
CTGTTCGCCT GGCCGGTCTG GCCGCTGGCC GCGTGGGCGT GGAAGAGCTG GGGCGGCATG
CGCACCGCCC CGCATATCAC GCTGCCGTTG GCCGTGCTGC TGCCGCAGTT GGTGCTGCTG
CTCATGCAGC CCCACCCGGG CGACGACGGC TTCCTGCTGC TGATTCCACC GATGGCCGTG
ATGGCCACGT TCGCGCTGCC GACGCTCAAG CGCGGCGCCA TCAGCGCGAT CGACTGGTTT
GCGCTGCTGG CCTTCACGAT CCTGGGCGGG ACGCTATGGC TACTGTGGAT CGCCAAGATG
ACAGGTTTTC CGCCTCAGCT TGCGCGCAAC GTCTACCGCA TCGTGCCGGG CTATCGGCCT
GAGTTCAGCT GGACCGCACT GGTCTGCGCA CTGCTCGTGA CGGCCGCGTG GGTGCTCATC
GTCGTCTGGC GCACATCGCG CGCACCCAAG GCGATCTGGC GCGCAGTGGT GATCTCGGCC
GCCGGCACCA CGCTGATGTG GGTGCTGATG ATGACGCTGT GGCTGCCCAC CATCAACTAC
GCCAAGACGT ACCGCGATGT CGCGCAGTCA GCCGCGCTTG CGCTGCCGCG TTCCTACGTG
TGCGTGCAGC CGATCCGCAT GGGCGATGCG CAGCTTGCCT CGTTCGCGTA CTTCGGCCAC
ATCCGTTTTG GCAATGCAGA AGACAATTGC GACATCCTGC TGCGTCACGA CCCGTACGAC
TACGGTGCAC CGACGAGCGT CTCCAACTAC GAGTGGCGCC CGATCTGGGA AGGCCGACGC
CCCGCCGACC GCGACGAGCA CTTCCGCATG TACCGCCTGA CCGAGGCGGC CACCGCCACA
CATCCGCCGC CCGCGCCGGC CACCACACGC CGGCGCAAGC TGCGCCAATA A
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| Protein sequence | MNTTRVSRIR LTAAATRELP RWLLLAICVI YGLSGLFSRD PWKNEDAAGF GAMWTLATGN
AQDWLMPNIV GRPVVQSGPL VFWIGGAFIR LFGQWLGPAD ASRLATALFF FVTSACIWYG
AYLLGRRPEV QPFEFVFGGQ PNTRDYGRTL ADGALLIFLA CVGLAQRGHE TTPLVGALCF
VAVAVYGLIR ALDKPVHGSL IYGIGIGCLS LAGGPILPLA ITVAVLMAAH ATRVLPLRPL
LTVALPVSLI LGCSWPVMTY LLANNPTDAV TYVREWARFD RHQYAGPTAH SLGFVARNLP
LFAWPVWPLA AWAWKSWGGM RTAPHITLPL AVLLPQLVLL LMQPHPGDDG FLLLIPPMAV
MATFALPTLK RGAISAIDWF ALLAFTILGG TLWLLWIAKM TGFPPQLARN VYRIVPGYRP
EFSWTALVCA LLVTAAWVLI VVWRTSRAPK AIWRAVVISA AGTTLMWVLM MTLWLPTINY
AKTYRDVAQS AALALPRSYV CVQPIRMGDA QLASFAYFGH IRFGNAEDNC DILLRHDPYD
YGAPTSVSNY EWRPIWEGRR PADRDEHFRM YRLTEAATAT HPPPAPATTR RRKLRQ
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