| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1023 |
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| Symbol | |
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| ID | 6286702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1083524 |
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| End bp | 1084870 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624595 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001898603 |
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| Protein GI | 187928116 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00302987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.449754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTCG CCGACGTCCG CCGCATTACC GCACTGGCTT GGCCGGTGCT GATCGGCCAG
TTGGCGGTCA TCGCTTTCGG CGTACTCGAT ACGGCGATGG CTGGCCGCGC GACTGCAGCA
GACCTCGCGG CCATCGGACT CGGCGGGTCG ATCTACGTGA CGGTGTACAT CAGCCTGATG
GGTGTGCTGC AAGCGCTCTC GCCCATCGCC GGCCAACTGT ATGGCGCGCA AAGGCACAGC
GAGATCGGCG AAGAAGTGCG CCAGGCTGTC TGGCTCGGGC TGGTGCTCGC GGCTATCGGC
ATGCTGATCC TGTGGTTCCC TGCGCCGCTA CTGCAACTGG CGGATGCGAC ACCGGAACTC
ACCGAGAAAG CCACCGCCTA TTTGCGGTAT GAAGCACTCG CATTGCCTGC TGCGCTCGGC
TTCCGGATCT ACTCTGCGTT GAACAACGCG CTGTCGCGCC CAGTGATGGT GACGGTGCTG
CAGCTCGCCG GCCTCGCCAT CAAATTTCCG CTCAACGCAC TGTTTCTGTA CGGCGGCATG
GGCGTCCCCG CGATGGGTGG CCCGGGCTGT GCACTCGCCT CGATGATTAT CAGCTGGCTA
TGGTTTGTGG CTGCGGCCGC CATCCTGATG CGCAATCCAG CGTACAAGCC GCTTGCGATT
TTCACGCACT ACTCGCCACC CAATCGCGCG CGGCTGTGGG CACTCGTACT CCTGGGTGTG
CCGATGGGCT TCACCTACCT GATCGAGATC ACATCGTTCA CGTTGATGGC GATCTTCATC
GCGCGTCTCG GTACGGTGGT CTTGGCAGGG CATCAGATTG CCGCCAACCT CGGGGCAGTG
GCCTACATGG TGCCGCTGTC CTTGTCGATC GCGACGTCGA CGCTGGCTGC GCAGTCGATC
GGCGCGCGCG ATCGCGTTGC GGCCCGACGC ATCTCGCTGA ACGGCATCAA ATTGGCGGTG
ATGTGCGCGA TCATCGTTTG CGCGGCCGTG CTGTTCTTGC GTCGCGAGCT GGTCAGCCTC
TACACGCACG ATGCTACTGT CCTGGCGATT GCGGTGCCGC TGCTGCCTTT CATCGCCTTC
TATCAGATGT TCGATGCGCT GCAGGTCATG ACTGCATTCA TCCTGCGCGC ATACAAGATC
GCGCTCATCC CGACCGTCAT CTACGCCTTA TCGCTGTGGG GCGTGGGTCT GGGCGGCGGC
TACGTGCTCG GATTTGGACT ACTGGGCGAG TTTGCGACGC CTCTGCGTGG CGCAGCCGGC
TTCTGGGCGG CCAATGCGCT CAGTTTGATG GTGGCCGGCG CGTTGCTGGT CAGCTATTTC
AATCGAGTTA GCCGTGCGCC CGATTAA
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| Protein sequence | MFVADVRRIT ALAWPVLIGQ LAVIAFGVLD TAMAGRATAA DLAAIGLGGS IYVTVYISLM
GVLQALSPIA GQLYGAQRHS EIGEEVRQAV WLGLVLAAIG MLILWFPAPL LQLADATPEL
TEKATAYLRY EALALPAALG FRIYSALNNA LSRPVMVTVL QLAGLAIKFP LNALFLYGGM
GVPAMGGPGC ALASMIISWL WFVAAAAILM RNPAYKPLAI FTHYSPPNRA RLWALVLLGV
PMGFTYLIEI TSFTLMAIFI ARLGTVVLAG HQIAANLGAV AYMVPLSLSI ATSTLAAQSI
GARDRVAARR ISLNGIKLAV MCAIIVCAAV LFLRRELVSL YTHDATVLAI AVPLLPFIAF
YQMFDALQVM TAFILRAYKI ALIPTVIYAL SLWGVGLGGG YVLGFGLLGE FATPLRGAAG
FWAANALSLM VAGALLVSYF NRVSRAPD
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