| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1018 |
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| Symbol | |
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| ID | 6287339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1078277 |
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| End bp | 1078924 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624587 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001898598 |
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| Protein GI | 187928111 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.121174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0409551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATT TCGTACTTCA TTCCATGGCG CGCCTGGCGG TAGGGGTTGT GATCGGCTGC
GGCGTGATGC TGTCGAATGC AGTGCATGCT GATACGGTCT TCAAAGACAC GGAAGTCCGC
GCCGACGTCA AGCCCGAGGC CAAACCGGGC CTCATCTCAA ACGTGATGAG CAAGACCGGC
GACGTCGTCA TGAACGCTCT GGGCATGATC GGGCTGCGCT ACCGTTTCGG CGGCAACACG
CCGGAATCGG GCCTCGACTG CAGCGGCTTC GTCCGCTACG TCTTCAACGA TACTTTCGGC
TTCCTGCTGC CGCGTCGCGC CGTGGAAATG AGCCGCGTTG GCACCAGCGT GGACACGGCG
GAACTGCGTC CGGGCGATTT GGTGTTCTTC AACACCATGC GCCACACGTT CTCGCACGTC
GGCATCTATA TCGGCGACAA CAAATTCGTG CACGCTCCCT CCACCGGCAG CAAGATCCGC
GTGGATGACA TGACCGCTTC GTACTGGGTG ACACGCTACA ACGGCGCCCG CCGCATCGAG
GGCAAGTCCG GTGCCGCAAT CAAGGACGGC GCCGACAACT TTGTCGAGCA ACTCAAGCGT
GTCGACCCGA ATGCCGCCGG CAAGCCGCTG GCAATGTACG GCGGTTGA
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| Protein sequence | MQHFVLHSMA RLAVGVVIGC GVMLSNAVHA DTVFKDTEVR ADVKPEAKPG LISNVMSKTG
DVVMNALGMI GLRYRFGGNT PESGLDCSGF VRYVFNDTFG FLLPRRAVEM SRVGTSVDTA
ELRPGDLVFF NTMRHTFSHV GIYIGDNKFV HAPSTGSKIR VDDMTASYWV TRYNGARRIE
GKSGAAIKDG ADNFVEQLKR VDPNAAGKPL AMYGG
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