| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1014 |
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| Symbol | |
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| ID | 6287288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1072289 |
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| End bp | 1074175 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624583 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001898594 |
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| Protein GI | 187928107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.517437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0342428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC GCGTTGCGAC ACACAAGCGA TTCATGGCGC TGGTCTGCCT GCTGGCGGCA
ATCTGCGTGA CACCCGCCTG GGCGGCACAC GGCTACGCCG AATATGGTGA CCTCAAGTAT
CCGGCCGGTT TCTCGAACTT CGGCTATCTG AACCCGAAGG CGCCCATCGG CGGCATGCTG
CTGCTCGGCA ACCCAGACCG CCGCACGAGC TTCGACAAGT TCAATCCGTT CACGATCAAG
GGAACGTCGG CGCCGGGGTT GAATCAGCTG GTCTTTGAAA GCCTGCTCAT TACAAGCTGG
GACGAAACCG CCAGCGGCTA TGGTCTGCTT GCGGACGACG TGACGGTCGC CCCCGACGAG
CTCTCGGTCA CCTTCCACAT CAACCCGCGC GCACGATTCT CCGACGGCGA TCGCGTGCGC
GCGTCCGACG TCAAATACTC CTACGACATG CTGATGGGCA AGGGGGCAAG CCCCGCCTAC
CGCAGCATGA CCGCGGATGT GGCCAAGGTC ACGGTGGTGG ACGCGAGCAC CATCCGCTAC
GACTTCAAGC GCAGGAACAA GGAGTTGCCG CTCATCGTCG GTGGGCTGCC GGTGTTCTCG
CCAAAGTGGG GCAAGGGCAG TGGCAAGCCC GATGATCCGG ACGGCGGCAA GGATGTCGCG
TTCGACAAGC TGACCTTCCA GGACCCGGTC GCGAGCGGCC CGTATGTGAT CGAGCGCTTT
GACCCGTCGC GCGGCATTAC CTTTCGGCGC AATCCCGCTT ACTGGGGGCG TGACCTGAAC
GTGCGCCGTG GCTCGTTCAA TTTCGAGCGC ATTCAGTACA AGCTCTACAA GGACGAAACC
GCCCGCCTGG AAGCGTTCAA GGCCGGCGAA TACGACGCCA TGGTGGAGTA CCGTGCCAAG
AACTGGGCCA AGAGCTATGT CGGCGTGAAG TTCCGCAGCG GCGAGCTGAT CAAAAGCGAA
TTCCCGCATC GCAACGGTGC CGGCATGCAG GGTTTTGTGA TGAACCTGCG GCGGCCGCTG
TTCCAGGACC TTCGCGTGCG CAAGGCGCTG ACGTTGGCGC TCGATTTCGA ATGGCTCAAT
CGCCAGCTCT TCTATGGTGC GTATCGCCGG CTTGACAGCT ACTTCGCCAA CAGCGAGCTG
GCCGCGTCGG ATTCACTCAC GGGCATGCCC AGCGCGGGCG AACTGGCGTT GCTGGAGCCG
CTTCGCAGCA AGCTCGACCC AGAGGTGTTT GGCGTGCTGC CCGCACCCCC CTCGACTGAT
GCTCCCAGCT CTCTGCGTGA CAACCTGCGG CAGGCGCGTC GCCTGCTGGC CCAGGCAGGT
TGGACATACT CCGATGGCGC GCTGCGCAAC ACCAAGGGCG AGCCGTTTGT CTTCGAGATG
CTCGACGATG GCGGCGCCAT GAGCCGCGTC ATGGCGGCAT ATGCGCGCAA CCTTGAGAAG
CTCGGCATCC AGGTCAACCA GCGCATGACC GATTTCGCGC TCTACCAGAA GCGACTGGAA
GAGTTTGATT TCGACATGAT CTCGCTGCGC TTCCCCGATT CGCAAAGCCC GGGCAACGAG
CTGAAGGACC GCTTCGGCTC CGCCGCAGCT GACGAGGCCG GCTCGGACAA CGTGATCGGC
CTGAAATCGC CAGCCGTGGA CGCGCTGATC GACGATGTAC TGCGTGCCAA CAATCGCGAC
GAGCTGGTCA CGGCTTCACG CGCGCTCGAC CGCGTGCTGA TGCGCGGCTG CTATGTGATT
CCGCACTGGT ATTCGGCCTC GCACCGTGTG GCTTACAACA AGAACCTGAT GTACCCGGAT
CGTTTGCCGT ACTACTACTC GGCCGAAGCC TGGGTGCTGA CGGCTTGGTG GCGGACGCCG
GACTCCGCCC AATCGGCTGC CAAATGA
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| Protein sequence | MSVRVATHKR FMALVCLLAA ICVTPAWAAH GYAEYGDLKY PAGFSNFGYL NPKAPIGGML
LLGNPDRRTS FDKFNPFTIK GTSAPGLNQL VFESLLITSW DETASGYGLL ADDVTVAPDE
LSVTFHINPR ARFSDGDRVR ASDVKYSYDM LMGKGASPAY RSMTADVAKV TVVDASTIRY
DFKRRNKELP LIVGGLPVFS PKWGKGSGKP DDPDGGKDVA FDKLTFQDPV ASGPYVIERF
DPSRGITFRR NPAYWGRDLN VRRGSFNFER IQYKLYKDET ARLEAFKAGE YDAMVEYRAK
NWAKSYVGVK FRSGELIKSE FPHRNGAGMQ GFVMNLRRPL FQDLRVRKAL TLALDFEWLN
RQLFYGAYRR LDSYFANSEL AASDSLTGMP SAGELALLEP LRSKLDPEVF GVLPAPPSTD
APSSLRDNLR QARRLLAQAG WTYSDGALRN TKGEPFVFEM LDDGGAMSRV MAAYARNLEK
LGIQVNQRMT DFALYQKRLE EFDFDMISLR FPDSQSPGNE LKDRFGSAAA DEAGSDNVIG
LKSPAVDALI DDVLRANNRD ELVTASRALD RVLMRGCYVI PHWYSASHRV AYNKNLMYPD
RLPYYYSAEA WVLTAWWRTP DSAQSAAK
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