| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1004 |
|---|
| Symbol | |
|---|
| ID | 6288083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1061794 |
|---|
| End bp | 1062612 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642624572 |
|---|
| Product | UDP-2,3-diacylglucosamine hydrolase |
|---|
| Protein accession | YP_001898584 |
|---|
| Protein GI | 187928097 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0775768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0895755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG CAGCGCACGC CGCACAGGCC TCCGCGCTGA AGACACCGGT CCGGGTTTCC
GGGCCGGTGT TTTTTATTTC GGATCTGCAC CTCACGGCCA GCATGCCGGC CACCGCCGCT
GCGTTCGAGC GCTTCCTGCG CACGCGCGCC CGCGAGGCAC GCACGCTCGT CATCCTGGGT
GACTTCTTTG AATACTGGGT CGGCGATGAA GAGTTGGCTG ATCCGTTCCA CCAGCACATC
GCCAGCCTGC TCGCAGAGCT TTCAGTGGCC GGCACGCGCG TGCTGTTCAT GCACGGCAAT
CGCGACTTCC TGCTCGGCAA GCGTTTCTTG AATGCCGCGC ACGCTACGCT GCTACCTGAT
CCCACCGTGC TGGAAGCGGA TGATGGCCAG CGCATCGTGC TTGCCCACGG CGACGCCCTC
TGCACGCGCG ACGCGGCCTA CATGCGCTTT CGCCACTGGA CGCGCAAGCG CTGGGTGCAG
CGGATATTCC TGACGATGCC GCTGCGCTGG CGGCTGAAGA TCGCGCAGAA GATGCGCGCA
GAAAGCGAAG CTGGCCGCGC CATGTCCGCC AATGTTGCCG GCGAACCCCG CGCCGCTGCG
ATGATGGGCG ACGTCGCACC TGATGCGGTG GACGCGCTGC TCAAGGCATC CAATACGTCC
ACGCTCATCC ACGGCCACAC GCACCGCCCG CAATTGCATC ACGAGCCGAG CGGCAGCCGC
TGGGTACTTT CCGACTGGGA TTTCGATCAA GCACACCCGC GCGGCAGTTT CCTCAAACTG
CAAGACGGCA CGCTGACGGT CGAGCAAGTG ACGACATAA
|
|---|
| Protein sequence | MIDAAHAAQA SALKTPVRVS GPVFFISDLH LTASMPATAA AFERFLRTRA REARTLVILG
DFFEYWVGDE ELADPFHQHI ASLLAELSVA GTRVLFMHGN RDFLLGKRFL NAAHATLLPD
PTVLEADDGQ RIVLAHGDAL CTRDAAYMRF RHWTRKRWVQ RIFLTMPLRW RLKIAQKMRA
ESEAGRAMSA NVAGEPRAAA MMGDVAPDAV DALLKASNTS TLIHGHTHRP QLHHEPSGSR
WVLSDWDFDQ AHPRGSFLKL QDGTLTVEQV TT
|
|---|
| |