Gene Rpic_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1003 
Symbol 
ID6288217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1061025 
End bp1061771 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID642624571 
Productserine O-acetyltransferase 
Protein accessionYP_001898583 
Protein GI187928096 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.169467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.127714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAC GCATTCGCGA AGATATCGGC GCCATCATGG AGCGAGACCC GGCTGCGCGC 
AGCCGCTGGG AAGTGCTGAC CTGCTACCCA GGTCTGCACG CCATCATCGT CCATCGGGTC
GCGCATGCGT GTTGGCACGG CGGCTTCCGG TGGCTGGGGC GCTGGTTCTC GCACCTCGGG
CGCTTTCTCA CCGGCATCGA GATTCATCCC GGCGCGACGG TCGGCCGGCG CGTGTTCATC
GACCACGGCA TGGGTGTCGT GATTGGCGAG ACGGCCGAGA TCGGTGACGA CTGCACGATC
TACCAAGGTG TCACGCTCGG AGGCACGTCG CTCTACAAGG GCGCCAAGCG GCATCCGACG
CTCGGCAAGG GCGTGGTGGT GAGCGCGGGC GCCAAGGTGC TTGGCGGCTT TGTCATCGGG
GATGGAGCGC GCGTTGGCTC CAACGCGGTC GTGCTCAAGC CGGTACCGCC GGGTGCTACG
GCGGTTGGCA TTCCGGCGCG CATCATCGAA CGCGATGTGG CCACCGAAGC CCAGTCTGCG
CTGAAGCAGG AGTTTTCCGC CTACGGCATC ACGCCGGATG CGGACGATCC GGTATCGCTG
GCACTCAAGC GGCTGATCGA CCACAGCGAG CTTCAGCAGG AGCGTATCGA GTCGATTCTT
TCTGCGCTGG ATCGCCTGGG CGCGCACCTG GAAAACTCGC CGAACGATCC GTTCGATGCG
AGCGAGCTGA AGCGGATGCT CAAGTAA
 
Protein sequence
MFTRIREDIG AIMERDPAAR SRWEVLTCYP GLHAIIVHRV AHACWHGGFR WLGRWFSHLG 
RFLTGIEIHP GATVGRRVFI DHGMGVVIGE TAEIGDDCTI YQGVTLGGTS LYKGAKRHPT
LGKGVVVSAG AKVLGGFVIG DGARVGSNAV VLKPVPPGAT AVGIPARIIE RDVATEAQSA
LKQEFSAYGI TPDADDPVSL ALKRLIDHSE LQQERIESIL SALDRLGAHL ENSPNDPFDA
SELKRMLK