Gene Rpic_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0978 
Symbol 
ID6286968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1035027 
End bp1035944 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID642624546 
Productalpha/beta hydrolase fold 
Protein accessionYP_001898558 
Protein GI187928071 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.754776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.076368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA CCACACAGCC TGCCGTGCGC CTGGCATCCC GCTCGACGTA CCTGCCCGTG 
CGCGGCCTGC GCTACCACAT CCGCGAATGG GGCGAGCCGG GTGCGCCAAT CCTCTTCCTG
TTTCACGGGT GGATGGATGT GTCGGCATCG TTCCAGTTTC TGGTCGACGC GCTGCGCCAG
CGCTGGCATA TCGTGGCGCC GGATTGGCGC GGCTACGGCC AGACCGCCCG GCCCACGGAC
GCCCCCGGCG TCGAGAGCTA CTGGTTTGCC GATTACGTGG CCGACCTCGA AGCCATCATC
GACCACTACC AGCCGGAAGG GCAGGTGACG CTGGTCGGGC ACAGCCTGGG CGCCAACGTG
GTTTGCCTGT ACGCGGGTAT CCGGCCCGAG CGCGTGCGGC GCGTGGTGGA TCTGGAAGGC
TTCGGCATGT CGGCGTCGAA GGCATCGCAG GCGCCGCGCC GCTATGCGCG ATGGCTCGAC
GAGCTGAAGG ACAAGCCGCG CCTGAACACC TACGCGACCG TCGAGGACGT CGCCGCGCGC
CTGCAGAAGA CCAACCCACG CCTGCCGGCC GACAAGGCCG CATTCCTGGC GCAACACTGG
TCGAGCCAGA ATGCTGACGG CCGCTGGGAG ATCCTCGGCG ACCCCGCGCA CAAGATCATC
AATCCGCAGC TTTATCGGCT GGATGAGGTG ATGGAAATCT GGCGCCGTGT TACCGCCCCC
GTGCTGCACG TCGAGGCAGT CGATTCGCCC ACACTAAAAG CCATTGCTGG CGACGTGCCG
CTGGCCGAGT TCAAGACGCG CTTTACGGCG TTTCCTGATT TCCGTGAGGT GCTGATTGCG
GATGCAGGGC ACATGCTGCA TCACGATCAG CCTGAACAGG TGGCCGCGCT GATCGAAGAG
TTCTGTTTGC AGCGCTAA
 
Protein sequence
MNSTTQPAVR LASRSTYLPV RGLRYHIREW GEPGAPILFL FHGWMDVSAS FQFLVDALRQ 
RWHIVAPDWR GYGQTARPTD APGVESYWFA DYVADLEAII DHYQPEGQVT LVGHSLGANV
VCLYAGIRPE RVRRVVDLEG FGMSASKASQ APRRYARWLD ELKDKPRLNT YATVEDVAAR
LQKTNPRLPA DKAAFLAQHW SSQNADGRWE ILGDPAHKII NPQLYRLDEV MEIWRRVTAP
VLHVEAVDSP TLKAIAGDVP LAEFKTRFTA FPDFREVLIA DAGHMLHHDQ PEQVAALIEE
FCLQR