Gene Rpic_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0937 
Symbol 
ID6286267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp990978 
End bp991553 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content61% 
IMG OID642624501 
ProductCDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_001898519 
Protein GI187928032 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.108967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.160093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCA ACTTCCCGAT CCTCCTGACC TGGTTGCGTG TGGCCATGAT CCCGCTGGTG 
GTGGGCGTGT TCTACGTGCC GGACACCTGG ATGGCACTGC CCGCCAAGAA CCTGACGGCC
GCGGTGTTCT TCATCGTAGC AAGCCTCACT GATTGGTTCG ACGGCTTTCT TGCTCGCCGC
TGGAACCAGA CCTCTGCTTT CGGTGCCTTC CTCGATCCGG TGGCCGACAA GCTGATGGTG
GCCGCCGCGC TGCTGGTGCT GCTGTCATTG GGCCGCGTGT CCGACGTCAT CGCACTCGTC
ATCATTGGCC GCGAGATCAC CATCTCCGCC CTGCGTGAGT GGATGGCGCA GATTGGCGCG
TCGAAGAGCG TGGCCGTCAA CTTTCTCGGC AAGCTGAAGA CGACCTTCCA GATGATCGCA
ATTCCGCTGC TGCTGTTCGA GGGCCGCCTG TTCGGCATGA TCGACGCGCA GGTGTGGGGC
ACATGGCTGA TTTACGTGGC GGCAGTACTC ACGCTGTGGT CGATGGCGTA CTACATGAAG
CTCGCCTGGC CGCAGATCCG CGAGCGCGCA AAATGA
 
Protein sequence
MPFNFPILLT WLRVAMIPLV VGVFYVPDTW MALPAKNLTA AVFFIVASLT DWFDGFLARR 
WNQTSAFGAF LDPVADKLMV AAALLVLLSL GRVSDVIALV IIGREITISA LREWMAQIGA
SKSVAVNFLG KLKTTFQMIA IPLLLFEGRL FGMIDAQVWG TWLIYVAAVL TLWSMAYYMK
LAWPQIRERA K