Gene Rpic_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0935 
Symbol 
ID6288710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp987651 
End bp988844 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID642624499 
Producthypothetical protein 
Protein accessionYP_001898517 
Protein GI187928030 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.224232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0374864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCA TCACATCCTG GGATCTTTTC TGCCGCGTCG TCGACAACTA TGGCGACATT 
GGCGTCTGCT GGCGCTTGGC TCGACAGCTT GTACAGGAGC ACGGCCACAC CGTCCGTCTG
TGGGTGGACG ATCTCCGTTC GTTCGAAAAG ATCTGCCCCG CTGTCGACGC AGAGGCCGAT
GCGCAGCGCG TCTCGGGCGT GGATATTCGC CACTGGGCTG ACGACGCCCA GGCTGCCAGC
CTCCTAGCCA CCGACGCACA TCCCGCGCTG CATGATGTGG TGATTGGCGC CTTCGCATGC
GCCGTCCCGG AGCCCCTACA GACGCTCATG GCCCAGCAGG CATCCCAAGG CCCGGCGCCG
GTTTGGATCA ACCTGGAATA CCTGAGCGCC GAGGACTGGG TTGCCGAACA TCACGCGATG
CAGTCGCCAC ATCTGCGACT GCCGCTCGTC AAGCACTTCT TCTTCCCCGG TTTTGCACGC
AACACCGGCG GCGTACTGCG GGAGTCGCAT CTTGGCGCGC AACGCAAGAC GTTCGAGGTA
AGCCCCGCCG CCCACCAGGC CTTATGGCAC CGACTCGGAG TCGACGACCT GATGCGCGAC
AACCCTGACG CCCTGCGCGT CAGCCTGTTC GCCTATGCCA ACTCGGCGCT GCCAACGCTG
GCCGCCCAAT GGGAAGCCTC ACCCCAACCG GTGATCTGCC TGGTGCCGGA GGGCCTGGCC
GCCAGACAGA TCGCCGAGCT ATTCGGCGAC GCCGACGCCG CCAGAACCGG CGCGCGATGG
GCGCGCGGCA ACCTGAGCGT GGCGGTCGTG CCTTTCGTGC CGCAAGAGCA CTACGACCCG
CTGCTCTGGG CATGCGACAT CAATTTCGTG CGCGGTGAAG ACTCGTTCGT GCGTGCCCAA
TGGGCGCTGA AACCGTTTGT CTGGCACATC TACCCCCAAA GCGACGACGT ACACCTCGCG
AAACTGGACG CTTTTCTGGC TCGCTATACC CCCGCTCTGG CAGAGGCCGA CGCCAAGGCG
CTTATCGCCT TCTGGCACGC CTGGAATGGT GCGCCAGCGC CACTCAACTG GACGGACTTT
GCAGCCGCCG CGCCTCGCCT GCGCGCACGG GCCGTCACTT GGGAGCAAAG CTTGATGCAA
CTAGGCGATC TCGCCGCGAA TCTGGTGGCA TTTTGCGAAA AACAGGTAAA ATAG
 
Protein sequence
MRTITSWDLF CRVVDNYGDI GVCWRLARQL VQEHGHTVRL WVDDLRSFEK ICPAVDAEAD 
AQRVSGVDIR HWADDAQAAS LLATDAHPAL HDVVIGAFAC AVPEPLQTLM AQQASQGPAP
VWINLEYLSA EDWVAEHHAM QSPHLRLPLV KHFFFPGFAR NTGGVLRESH LGAQRKTFEV
SPAAHQALWH RLGVDDLMRD NPDALRVSLF AYANSALPTL AAQWEASPQP VICLVPEGLA
ARQIAELFGD ADAARTGARW ARGNLSVAVV PFVPQEHYDP LLWACDINFV RGEDSFVRAQ
WALKPFVWHI YPQSDDVHLA KLDAFLARYT PALAEADAKA LIAFWHAWNG APAPLNWTDF
AAAAPRLRAR AVTWEQSLMQ LGDLAANLVA FCEKQVK