Gene Rpic_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0934 
Symbol 
ID6288709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp986959 
End bp987534 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content57% 
IMG OID642624498 
Productelongation factor P 
Protein accessionYP_001898516 
Protein GI187928029 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.118774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0465306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA AAATCGCGCA AGAACTTCGC GCTGGCAACG TGTTCATGAT CGGCAACGAC 
GCAATGGTCG TGCTCAAGAC CGAGTACAGC CGTTCGGGCC GTTCGGGCGC CGTCGTCAAG
ATGAAGTACA AGAACCTGCT GACCGGCGCA GGCGGCGAGT CGGTGTTCAA CGCCGACGAC
AAGATGGACC AGGTCATCCT GGAGAAGAAG GAAGCCGAGT ACTCCTACTT CGACGGCACG
ATGTACGTGT TCATGGATCC GGTCACCTAC GAACAATACA ACGTTGAGCC CGCCGCCATG
GGCAGCGCGT TGAACTACCT GCAAGACGGC ATGAAGGTCG AAGTGACGTT CTACAACGAG
AACGCCATCT CGGTGGAACT GCCGACCACG GTTGTCCGCG AAATCGTCTA CACCGAACCG
GCTGTCAAGG GCGACACGTC GTCGGGTAAG GTTCTGAAGG CGGCTCGCAT CAACGACAAC
GAAGAATTCA CGATCATGGT CCCGCTGTTC TGCAACATCG GCGAGAAGAT CGAAATCGAC
ACGCGTACCG ACGAGTACCG CAGCCGCGCC AAGTAA
 
Protein sequence
MALKIAQELR AGNVFMIGND AMVVLKTEYS RSGRSGAVVK MKYKNLLTGA GGESVFNADD 
KMDQVILEKK EAEYSYFDGT MYVFMDPVTY EQYNVEPAAM GSALNYLQDG MKVEVTFYNE
NAISVELPTT VVREIVYTEP AVKGDTSSGK VLKAARINDN EEFTIMVPLF CNIGEKIEID
TRTDEYRSRA K