Gene Rpic_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0931 
Symbol 
ID6289498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp984606 
End bp985397 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID642624495 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_001898513 
Protein GI187928026 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.292699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0653759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTTC ATGCCTCGCC GGGAATCATC GACCTGGGCA TCAATATCGA CCACGTCGCC 
ACGCTGCGCA ACGCGCGCGG CACCACCTAC CCGGACCCGA TCGCCGCGGC GCTGTTGGCC
GAAGAAGCCG GCGCCGATCT CATTACCCTG CACCTGCGCG AAGATCGCCG CCACATCAAG
GACGCCGATG TGCGCGCGCT GCGGCCGCAA CTGCGCACCC GCATGAACCT GGAGTGCGCC
GTCACGCAGG AGATGCTCGA CATCGCGTGC GATATCGGCC CCCAAGACGT CTGCCTCGTG
CCCGAGCGCC GTCAGGAAGT GACCACCGAA GGCGGCCTGG ACGTGGTGGG CGGTTTTGCC
AAGGTGCAAG CCGCTTGTAA GCAGCTGGCC GATGCGGGCA TCCGCGTGTC GCTGTTCATC
GATCCGGATG CGGCACAGAT CGAGGCGGCC GCCGCTGCCG GTGCTCCCGT CATCGAACTG
CATACGGGCC GCTATGCCGA AGCGACCGAC GATGCTGAGC TGCGGGCGGA ACTCGTCCGC
ATCGAGACCG CGGTGGAAGA GGGCATCCGC TGGGGCGTGC GTGTGAACGC TGGCCACGGC
CTCCACTACA CGAACGTGCA GCCGATCGCG GCCATCGCCG GCATTCATGA ACTCAACATC
GGCCACGCCG TCGTTGCGCA TGCGGTGTTT GCCGGGTGGC AGAACGCGGT GCGCGAGATG
AAGGCGATCA TGGTTGCGGC TCGGCTGTCG TCCACGACCC CGGCGGCCGC ACACCCGGGC
GTGCCTGTAT GA
 
Protein sequence
MIFHASPGII DLGINIDHVA TLRNARGTTY PDPIAAALLA EEAGADLITL HLREDRRHIK 
DADVRALRPQ LRTRMNLECA VTQEMLDIAC DIGPQDVCLV PERRQEVTTE GGLDVVGGFA
KVQAACKQLA DAGIRVSLFI DPDAAQIEAA AAAGAPVIEL HTGRYAEATD DAELRAELVR
IETAVEEGIR WGVRVNAGHG LHYTNVQPIA AIAGIHELNI GHAVVAHAVF AGWQNAVREM
KAIMVAARLS STTPAAAHPG VPV