Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0930 |
Symbol | recO |
ID | 6289497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 983788 |
End bp | 984609 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624494 |
Product | DNA repair protein RecO |
Protein accession | YP_001898512 |
Protein GI | 187928025 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.133285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.103629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGAC GATCCGATCC GATTCCGGAC GAGGCCGCGG AATGGCTGGC CGAGGAGGGC GTTGCCGGCG CCGCGCCGCG CAGGAGCTTT CCTGCCGGGC GTTCCGAAAC ACGTGTTGCT GCGCAGCCGG CCTTCGTGCT GCACAGTTAT CCGTATCGGG AAACCAGCCT CATCATCGAC GTCTTCACGC CGGACTACGG GCGCATGGCG CTGGTCGCCA AGGGGGCCAA GCGTCCGCAT TCGGCGTTGC GTGCGGTGTT GCAGACGTTC CAGCCGCTGT CGCTGTCCTG GAGCGGTCGC GGTGATGTGC GCACGCTGAC TCGCGCCGAG TGGGTGGGCG GCATGTTGCC GCTGGGCGGC GAGGGGCTGC TATCCGGGTT CTATCTGAAC GAACTGCTCG TCAAGTTCGT CGCCCGCGAA GACGGCCATC CGGTACTGTT CGCGCATTAC GTCGAAACAC TCAATAAGCT TGCCCATGGC GAACCCGCGG CCTTCACGCT GCGGGCGTTC GAACGTGTGC TGCTGCGTGA GACCGGCTTT GCCGCGCAGC TCGATCGCTG CATCGACGGC GAACCCGTGC AGGCCGACGC CGAATACGTC TATCACCCCG AGCGCGGCAT CCGGCGGACG CTTCCCAGCG ATCCATCGTC CTGGCCTGTG TTGCGCGGCC AGACGCTGAT CGACATGGAA CACGACGATT ACGCCTCGCG CCCCACGACC GCGCAGCAAA GCCGCAGCCT GATGCGTTTC CTGCTGCATT ATCATTTGCA TGGCACGCCG CTTTCGACGC GCCAGATCCT GATCGACTTG CAGAAACTAT GA
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Protein sequence | MAGRSDPIPD EAAEWLAEEG VAGAAPRRSF PAGRSETRVA AQPAFVLHSY PYRETSLIID VFTPDYGRMA LVAKGAKRPH SALRAVLQTF QPLSLSWSGR GDVRTLTRAE WVGGMLPLGG EGLLSGFYLN ELLVKFVARE DGHPVLFAHY VETLNKLAHG EPAAFTLRAF ERVLLRETGF AAQLDRCIDG EPVQADAEYV YHPERGIRRT LPSDPSSWPV LRGQTLIDME HDDYASRPTT AQQSRSLMRF LLHYHLHGTP LSTRQILIDL QKL
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