Gene Rpic_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0930 
SymbolrecO 
ID6289497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp983788 
End bp984609 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID642624494 
ProductDNA repair protein RecO 
Protein accessionYP_001898512 
Protein GI187928025 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.133285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.103629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAC GATCCGATCC GATTCCGGAC GAGGCCGCGG AATGGCTGGC CGAGGAGGGC 
GTTGCCGGCG CCGCGCCGCG CAGGAGCTTT CCTGCCGGGC GTTCCGAAAC ACGTGTTGCT
GCGCAGCCGG CCTTCGTGCT GCACAGTTAT CCGTATCGGG AAACCAGCCT CATCATCGAC
GTCTTCACGC CGGACTACGG GCGCATGGCG CTGGTCGCCA AGGGGGCCAA GCGTCCGCAT
TCGGCGTTGC GTGCGGTGTT GCAGACGTTC CAGCCGCTGT CGCTGTCCTG GAGCGGTCGC
GGTGATGTGC GCACGCTGAC TCGCGCCGAG TGGGTGGGCG GCATGTTGCC GCTGGGCGGC
GAGGGGCTGC TATCCGGGTT CTATCTGAAC GAACTGCTCG TCAAGTTCGT CGCCCGCGAA
GACGGCCATC CGGTACTGTT CGCGCATTAC GTCGAAACAC TCAATAAGCT TGCCCATGGC
GAACCCGCGG CCTTCACGCT GCGGGCGTTC GAACGTGTGC TGCTGCGTGA GACCGGCTTT
GCCGCGCAGC TCGATCGCTG CATCGACGGC GAACCCGTGC AGGCCGACGC CGAATACGTC
TATCACCCCG AGCGCGGCAT CCGGCGGACG CTTCCCAGCG ATCCATCGTC CTGGCCTGTG
TTGCGCGGCC AGACGCTGAT CGACATGGAA CACGACGATT ACGCCTCGCG CCCCACGACC
GCGCAGCAAA GCCGCAGCCT GATGCGTTTC CTGCTGCATT ATCATTTGCA TGGCACGCCG
CTTTCGACGC GCCAGATCCT GATCGACTTG CAGAAACTAT GA
 
Protein sequence
MAGRSDPIPD EAAEWLAEEG VAGAAPRRSF PAGRSETRVA AQPAFVLHSY PYRETSLIID 
VFTPDYGRMA LVAKGAKRPH SALRAVLQTF QPLSLSWSGR GDVRTLTRAE WVGGMLPLGG
EGLLSGFYLN ELLVKFVARE DGHPVLFAHY VETLNKLAHG EPAAFTLRAF ERVLLRETGF
AAQLDRCIDG EPVQADAEYV YHPERGIRRT LPSDPSSWPV LRGQTLIDME HDDYASRPTT
AQQSRSLMRF LLHYHLHGTP LSTRQILIDL QKL