Gene Rpic_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0929 
Symbolera 
ID6289496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp982818 
End bp983756 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID642624493 
ProductGTP-binding protein Era 
Protein accessionYP_001898511 
Protein GI187928024 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.163867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.15052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCCCATTGCA GCCTCCGCAG CCAGAATCTG GCGTGCCGGA GGGGTTCCGC 
TGCGGCATGG TCGCCATTGT TGGGCGGCCG AACGTCGGCA AATCCACGCT GATGAACGCC
CTCGTGGGCC AGAAAGTCAG CATCACATCG CGCAAGGCGC AGACCACGCG CCACCGCATC
ACTGGCATTC AGACGACGGA TGACGCGCAG TTCGTCTTCG TCGATACGCC GGGCTTCCAG
ACGCGTCACG CCACCGCGCT GAACCGGTCG CTGAACCGCG CGGTCACGTC CACGCTCACG
TCGGTGGATG CCGTGTTGTT CGTGGTCGAA GCCGGCCGCT ATGGCCCGGA CGACGAGAAG
GTGCTCTCGC TGCTGCCGCG CGAGACGCCC GTGATCCTGA TCGTCAATAA GGTCGACCGG
CTCGATGCGT ACACGCGCGC CGAGATGGTC GCCGTGTTCC TGCAGGACAT GGCACAGGTG
TTTCCGTTTG CCGAAATCGT GCCGATGTCG GCCAAGAATC GCGACGACAT CGACCGCTTG
CTCGGCATCG TGCGCCCGTA CCTGCCGGAA GGCGAACCGA TGTACGACCC GGAAGCGCTG
ACCGATCGCA GCGAGCGCTT CCTGGCCGCC GAAATTGTTC GTGAGAAGGT CTTCCGCTGG
ACTGGCGACG AGTTACCGTA TTCCAGCACC GTCATCGTCG ACAAATTCGA AACCGAAGGT
CGCCTGCGCC GCGTGTTCGT GACCATTCTG GTCGATCGCG ATGCCCACAA GGCGATGATC
ATCGGTGCGA AGGGCGCCAA GCTCAAGCAG ATCTCCACCG AAGCCCGCAT GGACATGGAA
AAGCTGTTCG ACGGCAAGGT GTATCTGGAG GTCTGGATCA AGGTCAAGAG CGGTTGGGCC
GACAACGAAG CCGGCCTGCG CGCCTACGGC TACGAATAA
 
Protein sequence
MSDTPLQPPQ PESGVPEGFR CGMVAIVGRP NVGKSTLMNA LVGQKVSITS RKAQTTRHRI 
TGIQTTDDAQ FVFVDTPGFQ TRHATALNRS LNRAVTSTLT SVDAVLFVVE AGRYGPDDEK
VLSLLPRETP VILIVNKVDR LDAYTRAEMV AVFLQDMAQV FPFAEIVPMS AKNRDDIDRL
LGIVRPYLPE GEPMYDPEAL TDRSERFLAA EIVREKVFRW TGDELPYSST VIVDKFETEG
RLRRVFVTIL VDRDAHKAMI IGAKGAKLKQ ISTEARMDME KLFDGKVYLE VWIKVKSGWA
DNEAGLRAYG YE