Gene Rpic_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0917 
SymbolfabG 
ID6287568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp971229 
End bp971978 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID642624481 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001898499 
Protein GI187928012 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.213986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CATTGAACAA TCAGGTTGCG CTCGTTACCG GTGCCTCGCG CGGCATCGGC 
CGTGCCATCG CGCTGGAACT GGCACGCCAG GGTGCGACGG TGGTCGGTAC GGCCACGTCG
GAAGCCGGAG CACAAGCCAT CACGGCTTAC TTTGCCGAAG CCGGCGTAAA GGGTGCAGGC
GTGGTGCTCA ACGTGAATGA CGCCGCGCGC TGCGAGGCCG TCATCGACGA AACCATCAAG
ACGTACGGTG GCCTGAACAT CCTCGTCAAC AATGCCGGCA TCACTCAGGA CAACCTGGCG
ATGCGCATGA AGGACGACGA ATGGGTGTCG GTCATCGATA CGAACCTCTC TGCTGTGTTC
CGCCTGTCGC GTGCCGTACT GCGCCCGATG ATGAAGGCCC GCGGCGGTCG AATCATCAAC
ATCACTTCGG TGGTGGGCTC CGCCGGCAAC CCGGGTCAGG CGAACTACGC CGCGGCCAAG
GCTGGTGTGG AAGGTATGGC CCGCGCGCTG GCACGAGAGA TCGGTAGCCG TAACATCACG
GTCAACTGCA TCGCCCCGGG CTTTATCGAT ACCGACATGA CCAAGGTCCT GTCGGAAGAG
CAACATACTG CGCTGAAGGC GCAGATTCCG CTGGGCCGCC TGGGCGCGCC CGAGGATATC
GCCAACGCAG TTGCCTTCCT GGCGTCACCG GCGGCGGGCT ACATTACAGG CTCGACGCTG
CACGTCAACG GCGGCATGTA CATGGGATAA
 
Protein sequence
MTQALNNQVA LVTGASRGIG RAIALELARQ GATVVGTATS EAGAQAITAY FAEAGVKGAG 
VVLNVNDAAR CEAVIDETIK TYGGLNILVN NAGITQDNLA MRMKDDEWVS VIDTNLSAVF
RLSRAVLRPM MKARGGRIIN ITSVVGSAGN PGQANYAAAK AGVEGMARAL AREIGSRNIT
VNCIAPGFID TDMTKVLSEE QHTALKAQIP LGRLGAPEDI ANAVAFLASP AAGYITGSTL
HVNGGMYMG