Gene Rpic_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0897 
Symbol 
ID6287449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp950098 
End bp950817 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID642624461 
Productprotein of unknown function DUF162 
Protein accessionYP_001898479 
Protein GI187927992 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0189235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAC AACCGGACAC CCCCGTCGAC CCGCTCGACA CCAGCCGCGC ACGCGACGCC 
ATCTTTGCGC GCATCCGCAA TGCGCAGCAT CGTCCCGCGA AACCGACGCA GGGTGAGCGC
GATGCCGTGG CGGATTACCT CGCGCGCCAC CCCGCCGGCC CGCGCCCGCC GGTGCCGGAA
AACCTTGCCG CGCATTTTGC CGAGCAGGCG CTGAAGATGG CTTCCACGCT GGATACCGTG
GAGGCGCTGT CCGACGTGCC GGGCGCGGTG GCCCGTTACT TGTCTGGGCT GAACCTCCGG
CCGCAGGCCG TGGCCTGGAC TACGTTGGAA TCGCTGGACT GGGCCGCTGC TGGCATCGGC
ATCGAATTCC GTCCGCCGGT GCGCGAGGCG CAAGCCGATC AGGAGCACGG CGATCTCGTC
GGCATTACGG GTTGCTTCTG CGCGATTGCT GAGACGGGCT CGCTGATGCT GCTGTCGGGG
CCGGAGAACG TCGCTTCCAC GGCGCTGCTG CCCGAGACGC ATATCGCCGT GGTTCCGCAG
TCGCGCATCG TCGCCAATCT GGAAGATGCC TATTCGCTGA TGCGCGCGGA GCGAGGCGAG
CTGCCACGCG CCACCAACGT CATCAGCGGG CCGTCGCGCA CGGGGGATAT CGAGCAGACC
ATCGTGCTCG GCGCACATGG CCCGTATCGG GTGCATGTGA TCGTGGTGTC GACTGCCTGA
 
Protein sequence
MESQPDTPVD PLDTSRARDA IFARIRNAQH RPAKPTQGER DAVADYLARH PAGPRPPVPE 
NLAAHFAEQA LKMASTLDTV EALSDVPGAV ARYLSGLNLR PQAVAWTTLE SLDWAAAGIG
IEFRPPVREA QADQEHGDLV GITGCFCAIA ETGSLMLLSG PENVASTALL PETHIAVVPQ
SRIVANLEDA YSLMRAERGE LPRATNVISG PSRTGDIEQT IVLGAHGPYR VHVIVVSTA