Gene Rpic_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0895 
Symbol 
ID6288373 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp947554 
End bp948658 
Gene Length1105 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID642624459 
Producthypothetical protein 
Protein accessionYP_001898477 
Protein GI187927990 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0852209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG AACGCCTCAA TGCCATCCAG AACACGTTGG CCGACCTGAA GTCGCGCGCC 
GACGACCTTC GGAGGTATCT TTGACTACGA CGTCAAATCT GAACGTCTAG TCGAAGTCGA
CAAGGAACTC GAAAACCCCG AGGTCTGGAA CGATCCCAAA CGCGCCCAGG AGCTGGGCCG
CGAGAAGAAG TCGCTTGAAA CCGTCGTGCT GGCGCTGACC AAACTTGACG AAGATCTCAC
CGGCGCCGCC GAACTGTTCG AGCTCGCCCG CGAAGAGGGC GACGACGAGA CCATCGAAGC
CATCGAGGCT GACACCGCAG GCATGCGCGC CATCGTCGAA GACATGGAAT TCCGCCGCAT
GTTCTCCGGC CCGATGGACG CCGCCAACTG CTTTATTGAC ATCCAGGCCG GCGCCGGCGG
CACCGAGGCG TGCGACTGGG CATCGATGCT GCTGCGCCAG TACCTGAAGT ACTGCGAGCG
CAAGGGCTTC AAGACCGAAG TCCTGGAAGA ATCCGAAGGC GACGTGGCCG GCATCAAGAG
CGCGTCGATC AAGGTCGAGG GCGAATACGC GTTTGGCTTC CTGCGCACCG AAACCGGCGT
GCACCGTCTG GTGCGCAAAT CGCCGTTCGA CTCGGCGGGT GGCCGCCACA CGTCGTTCTC
GTCGATCTTC GTGTATCCGG AAGTCGATGA TTCGATCGAG ATCGAGGTCA ACCCGGCGGA
TCTGCGCGTT GATACGTACC GTGCTTCCGG TGCGGGCGGT CAGCACATCA ACAAGACCGA
CTCGGCCGTG CGGATTACGC ACATCCCGAC CGGCATCGTC GTGCAGTGCC AGAACGACCG
CTCGCAGCAC CGCAACCGTG CCGAGGCGAT GACGATGCTG AAGTCGCGCC TGTATGAGCA
CGAACTGCGC AAGCGTCAGG CCGCTGCAGA CGCACAAGAA GCAGCCAAGA CCGACGTGGG
CTGGGGCCAT CAGATCCGCT CGTACGTGCT GGACCAGAGC CGTATCAAGG ATCTGCGCAC
CAACGTGGAA ATCTCCAACA CGCAGAAGGT GCTGGACGGC GATCTGGACC CGTTTATTCA
GGCGAGCCTG AAGCAGGGCG TCTGA
 
Protein sequence
MEAERLNAIQ NTLADLKSRA DDLRRYLDYD VKSERLVEVD KELENPEVWN DPKRAQELGR 
EKKSLETVVL ALTKLDEDLT GAAELFELAR EEGDDETIEA IEADTAGMRA IVEDMEFRRM
FSGPMDAANC FIDIQAGAGG TEACDWASML LRQYLKYCER KGFKTEVLEE SEGDVAGIKS
ASIKVEGEYA FGFLRTETGV HRLVRKSPFD SAGGRHTSFS SIFVYPEVDD SIEIEVNPAD
LRVDTYRASG AGGQHINKTD SAVRITHIPT GIVVQCQNDR SQHRNRAEAM TMLKSRLYEH
ELRKRQAAAD AQEAAKTDVG WGHQIRSYVL DQSRIKDLRT NVEISNTQKV LDGDLDPFIQ
ASLKQGV