| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0894 |
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| Symbol | |
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| ID | 6288372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 946788 |
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| End bp | 947528 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642624458 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001898476 |
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| Protein GI | 187927989 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.211983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0749879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA CGTCCCTGTT CATCCTGACC GGTGCCTCGC GCGGCCTGGG CGCCGCGCTG
GCCCAGGCGC TGATGCAACC CGGTCGCCGC CTCATCTGCG TCGCACGCGG CGATAACGCC
GAATTGCGCG CGCAGGCGGC AGCCGCCGGT GTGACGCTCG ACTGGCACCA GGTCGACCTG
TCCGACGCGC ATGCCGCCGA GGCTTGGATG ACCAAGACGC TTGCCGCCCT GCCCGCTTTT
GCCAACGTGA CGCTGGTGCT CAACGCCGGC GCGGTCGAGC CGATCGGCAC CATCGACACA
TTGCGCGCCG ATACGCTGCT GCCGCACCTG CAACTGAACC TGGCCGGCCC GATGGCGCTG
ACCGCTGCCC TGCTGCGCGG CACCTCCGGG TGGAACGCGC AGCGCCGCGT GCTGGCGATC
TCGTCGGGCG CTGCGCGCCG GCCGATCGCC GGCTGGGCGG CGTATTGCAC CGGCAAGGCC
GGGCTGGACA TGTTCGTGCG CGCCATCAAT GCCGATGGCG ACGCGAGCGT GCGCGCCGTG
GCACTCGCCC CCGGCGTGAT CGACACCGAC ATGCAACGCA CCATCCGTGG CGCCGACTTT
GCCGGCGTGC AGCGCTTCCG CGATCTGCAC GCGCATGGCG AGTTTGTCTC GCCGCAGGTC
GCCGCCACGC GCATCGCCGC CTACCTCGTC CGCCCCGACT TTGGCGCGAC CGAGCTAGAC
GACCTGCGCA ACATCGCCTG A
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| Protein sequence | MSDTSLFILT GASRGLGAAL AQALMQPGRR LICVARGDNA ELRAQAAAAG VTLDWHQVDL
SDAHAAEAWM TKTLAALPAF ANVTLVLNAG AVEPIGTIDT LRADTLLPHL QLNLAGPMAL
TAALLRGTSG WNAQRRVLAI SSGAARRPIA GWAAYCTGKA GLDMFVRAIN ADGDASVRAV
ALAPGVIDTD MQRTIRGADF AGVQRFRDLH AHGEFVSPQV AATRIAAYLV RPDFGATELD
DLRNIA
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