Gene Rpic_0889 details

Gene Information

• Locus tag: Rpic_0889
• Symbol: hscA
• ID: 6289321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 941658
• End bp: 943523
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642624453
• Product: chaperone protein HscA
• Protein accession: YP_001898471
• Protein GI: 187927984
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.0490665
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTTTAC TGCAGATTTC CGAACCTGGC GAATCACCCG CACCGCACCA GCGCCGTCTG 
GCGGTCGGCA TCGACCTGGG CACGACCAAC TCGCTGGTGG CCTCCGTGCG CAGCAGCGTG 
CCGGAAGTGC TGCCCGACGA TCAGGGGCGC CCCCTATTGC CCTCCGTGGT GCGCTACCTG 
CCCACAGGCG GTGCGCATAT CGGCTACAAG GCCCAGGCCG AAGCCGTGCG CGACCCGAAG 
AACACCATCA TCTCGGTCAA GCGTTTCATG GGGCGTGGCC TGAAGGATGT TGCCCACATC 
GAGAACACGC CGTACGACTT TGTCGACGCG CCCGGCATGG TGCAGTTGAA GACCGTGGCC 
GGCGTGAAGA GCCCGGTGGA AGTGTCGGCG GAGATCCTGG CCACGCTGCG CCAGCGCGCG 
GAAGATACGC TCGGCGATGA ACTCGTCGGC GCCGTCATCA CTGTCCCTGC GTACTTTGAC 
GACGCACAGC GGCAAGCCAC CAAGGACGCC GCCAAGCTGG CGGGCCTGAA CGTGCTGCGC 
CTGCTGAACG AGCCGACCGC AGCTGCCATC GCCTATGGCC TGGACAACGG CTCCGAAGGC 
ATCTACGCGG TCTACGACCT GGGTGGCGGT ACGTTCGACA TCTCTGTGCT CAAGCTCACC 
AAGGGCGTGT TCGAGGTGAT GTCGACGGGC GGGGACTCCG CGCTCGGCGG TGACGATTTC 
GACCAGCGCA TCGTGTGCTG GGTCGTCGAG CAGGCCGGCC TGCAACCGCT CTCTGCCGAA 
GACACGCGCC TGCTGCTGAA CAAGGCGCGG GCCGCCAAGG AATGGCTGTC CACCGCCGAC 
AGCACCGAGA TCGACGCGAT GCTCTCCACC GGCGAGACCG TGCATCTCGT GCTGACCGCT 
GAGACCTTTG CCGAACTGAC CGCCACTCTC GTGCAGAAGA CGCTGTCGCC CGTGCGCCGT 
GCGCTGCGCG ATGCAGGCGT GACGGTGGAA GACGTAAAGG GCGTGGTGCT CGTAGGCGGC 
GCGACGCGCA TGCCGATCAT CCGCCGTGCC GTGGGTCAGC TGTTCGGTCA GACGCCGCTC 
ACGAACCTCG ATCCGGATCA GGTGGTCGCC ATTGGCGCGG CCATGCAGGC CAACCTGTTG 
GCCGGTAACC GGGCACCGGG TGAAGACTGG CTGCTGCTCG ACGTGATCCC GCTGTCGCTG 
GGCGTCGAGA CGATGGGTGG CCTGGTCGAG AAGATCATCC CGCGCAACAG CACGATTCCC 
GTCGCACGCG CCCAGGAATT CACCACCTTC AAGGACGGCC AGACGGCGAT GGCGATCCAC 
GTCCTGCAAG GCGAGCGCGA ACTGGCGAGC GATTGTCGAT CCTTGGCGCG TTTCGAGTTG 
CGCGGCATCC CGCCGATGGT GGCTGGCGCC GCACGCATCC GCGTGACGTA TCAGGTGGAT 
GCCGATGGCT TGCTATCGGT GTCCGCACGC GAAACGGTGT CGGGCGTGGA AGCGTCGATT 
GCGGTGAAGC CGTCGTACGG TCTGGGCGAT GACGATGTCG CCCGCATGTT GCAGGAAGGT 
TTCCAATCCG CCGAAGACGA CATGCGCCGT CGAGCGCTGG CCGAAGAGCG CGTTGAAGGC 
GAACGCCTGC TTGAGGCGCT GTCACAGGCG CTGGCGGCCG ATGGCGATCT GCTGTCGCCC 
GAGGAGCGTG CCGCCATCGA CACCGAAATT GCCGCGCTGC GCACCACCAT GCAGGGCGAA 
GACCATCGCG CCATCAAGGA CGCCGTGGAT GCCCTGTCGC ATGGCACCGA CGAATTCGCC 
GCGCGCCGCA TGGACCGCGG CATTCGCAAG GCGCTCGCCG GCAAACGTAT CGAGGAACTC 
GGCTGA 

 

Protein sequence

MALLQISEPG ESPAPHQRRL AVGIDLGTTN SLVASVRSSV PEVLPDDQGR PLLPSVVRYL 
PTGGAHIGYK AQAEAVRDPK NTIISVKRFM GRGLKDVAHI ENTPYDFVDA PGMVQLKTVA 
GVKSPVEVSA EILATLRQRA EDTLGDELVG AVITVPAYFD DAQRQATKDA AKLAGLNVLR 
LLNEPTAAAI AYGLDNGSEG IYAVYDLGGG TFDISVLKLT KGVFEVMSTG GDSALGGDDF 
DQRIVCWVVE QAGLQPLSAE DTRLLLNKAR AAKEWLSTAD STEIDAMLST GETVHLVLTA 
ETFAELTATL VQKTLSPVRR ALRDAGVTVE DVKGVVLVGG ATRMPIIRRA VGQLFGQTPL 
TNLDPDQVVA IGAAMQANLL AGNRAPGEDW LLLDVIPLSL GVETMGGLVE KIIPRNSTIP 
VARAQEFTTF KDGQTAMAIH VLQGERELAS DCRSLARFEL RGIPPMVAGA ARIRVTYQVD 
ADGLLSVSAR ETVSGVEASI AVKPSYGLGD DDVARMLQEG FQSAEDDMRR RALAEERVEG 
ERLLEALSQA LAADGDLLSP EERAAIDTEI AALRTTMQGE DHRAIKDAVD ALSHGTDEFA 
ARRMDRGIRK ALAGKRIEEL G