Gene Rpic_0888 details

Gene Information

• Locus tag: Rpic_0888
• Symbol: hscB
• ID: 6289320
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 941049
• End bp: 941588
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642624452
• Product: co-chaperone HscB
• Protein accession: YP_001898470
• Protein GI: 187927983
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.0521212
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTCCG GCTTGTCAGC GAACACGACG CATTTTTCTC TCTTCGGTCT GCCCGAGCAC 
TTCGAGGTCG ACGACGACGC GCTGAACGCT GCGTATCGCA CCGTGCAGTC GCAGGCGCAT 
CCGGATCGTT ATGCCCATGC GGGCGATGCC GAACGCCGCG TCGCCATGCA GTGGGCCACA 
CGTGCGAACG AGGCGTATCA GACGCTGCGT GACCCGCTCA AACGGGCGAC GTATCTGCTG 
CACCTGCGCG GTATCGACGT GCAGGCAGAG AACAACACGG CCATGCCGCC CGCGTTTCTG 
ATGCAGCAAA TGGAATGGCG CGAAGCCTTG GGCGACGCCA AGGCGGAGCG CAACGTCGAT 
GCGCTGGATG ATTTGCTTGG CATGCTGCGC AAGGAAAAAC GCACGCGCTA TCAGGCGCTG 
TCCGGTCTGC TCAATAGCGA TGGCAACACC GCAGCAGCAG CCGATGCCGT GCGCCAATTG 
ATGTTCATCG AAAAGATCGA ACGCGACACC GCCGAGGCCA TCGACCGGCT GGAAGACTAG 

 

Protein sequence

MNSGLSANTT HFSLFGLPEH FEVDDDALNA AYRTVQSQAH PDRYAHAGDA ERRVAMQWAT 
RANEAYQTLR DPLKRATYLL HLRGIDVQAE NNTAMPPAFL MQQMEWREAL GDAKAERNVD 
ALDDLLGMLR KEKRTRYQAL SGLLNSDGNT AAAADAVRQL MFIEKIERDT AEAIDRLED