Gene Rpic_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0882 
Symbol 
ID6289840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp936718 
End bp937677 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content64% 
IMG OID642624446 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001898464 
Protein GI187927977 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.577745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.335079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCC GCCGTCGCCG CGCCCTGCAA CTTGGCGCGG GCTCTGTCGT AGCTGCTGCT 
CTGCCGTTCC CATTTTCGCT GGCGCACGCC GCCAACCAGC CGCCCAAGGT GGCGTTGGTG
ATGAAGTCGC TTGCCAACGA GTTCTTCCTG ACCATGGAGA ACGGCGCGCG TAAGCATCAG
AAGGATCACG CGTCGGAGTA TTCACTGCTG ACCAACGGCA TTCGCGACGA AACCGACACC
GCTGGCCAAA TCCGTCTGGT CGAGCAGATG ATCGTCGCGC GCGTGGATGC GCTGGTGCTG
GCCCCGGCCG ATTCCAAGGC GTTGGTGCCG GTCGTCAAGA AGGCCGTGGA CGCGGGCATT
CTCGTCATCA ACATCGACAA CAGGCTGGAC CCCGCGGCAC TGAAAGAGAA AGGGCTGAAC
GTGCCCTTCG TGGGGCCGGA CAACCGCAAG GGTGCACGAC TGGTGGGCGA CTTCGTTGCC
AAGTCGCTCA AGCCGGGCGA TGCCGTGGGC ATCATCGAAG GCATACCGAC CACCACGAAC
GCCCAGCAAC GTACCGCTGG CTTCAAGGAC GCCGCCGAAG CCGCCAAGCT GAAGATCGCG
GGGGTGCAAT CGGGCGAATG GGAAATCGAC AAGGGAAACA AGGTGGCAGC CGCCATGCTG
CGCTCCGAGC CCGACCTGAA GGCCCTGCTG TGCGGCAACG ACAACATGGC GATCGGCGCC
GTATCGGCTG TGCGCGCGGC GGGCAAGCTG GGCAAGGTGC TGATTGGCGG CTATGACAAC
ATCGACGCCA TCAAGGCCAT GCTGGCTGAC GGGCGTGTCG TTGCGACGGC CGATCAGCAC
GCCGATCAGC AAGCCGTCTA CGGCATCGAG ACCGCCCTGA AGGCGTTAGC CGCCAAGACG
CCGCAAGCGA AGCTGTCGGG TGTCGTCGAG ACACCGGTCA ACCTCGTCAC GCGCACGTAA
 
Protein sequence
MDIRRRRALQ LGAGSVVAAA LPFPFSLAHA ANQPPKVALV MKSLANEFFL TMENGARKHQ 
KDHASEYSLL TNGIRDETDT AGQIRLVEQM IVARVDALVL APADSKALVP VVKKAVDAGI
LVINIDNRLD PAALKEKGLN VPFVGPDNRK GARLVGDFVA KSLKPGDAVG IIEGIPTTTN
AQQRTAGFKD AAEAAKLKIA GVQSGEWEID KGNKVAAAML RSEPDLKALL CGNDNMAIGA
VSAVRAAGKL GKVLIGGYDN IDAIKAMLAD GRVVATADQH ADQQAVYGIE TALKALAAKT
PQAKLSGVVE TPVNLVTRT