| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0881 |
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| Symbol | |
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| ID | 6289839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 935108 |
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| End bp | 936688 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642624445 |
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| Product | ABC transporter related |
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| Protein accession | YP_001898463 |
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| Protein GI | 187927976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.218523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.474832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCG CTTACGAACC GCGCCCGCCG CTGCTTCGTG TTTCCGCCGT CAGCAAGCAC
TACGCCGCCC CCGTGCTGCG AGATATCGAT CTCGACGTGC ACGCGGGCGA GGTGCTCGCG
CTCACGGGGG AGAACGGCGC CGGCAAGAGC ACGCTCTCCA AAATCCTCTG CGGGCTTGAG
ACGGCGACTT CCGGGTCGAT GACGCTTGCC GGCACGCTCT ACGCGCCTGA TTCGCGCAGC
GCAGCCGAGG CGCTGGGCGT GCGCATGGTG CTGCAGGAAC TGAGCATGGT GCCGACGCTG
ACAGTGGCCG AAAACCTGTT CCTCGGCGAA CTCCCCCGGC GGCTGGGTTT CGTGGATCGC
TCTGCGCTGC GCTTTCGGGC CGAACAGGCG CTTGCGCGCG TGGGCCTGGA CCTCGACCCC
TGGACGCCCG TACACACGCT CGGCATCGGC CACCGGCAGA TGATCGAGAT TGCCCGCGCG
TTGGCAAGCG CATGCCGTGT GCTGATCCTC GACGAGCCGA CGGCGATGCT GAGCGCGCAC
GAAAGCGCCA CGCTGTTCGA GCGCATCGAC GCGCTGCGCC GCGAAGGCGT GGCGATCATC
TACATCTCTC ACCGCCTGGA CGAACTGGCG CGCATTGCGG ATCGCATCGT CGTGCTGCGT
GACGGCAAGC TCGTCACCGA TGCGCCGGCT GCGACGGTCA CGCAGGATGC GCTGATCCAG
GCGATGGTCG GTCGCGACGT GGCCGCCTCG TCCGAAACGC AGCGGGCCGC GCGCGAACCG
TGGCTCGGTG ACGGCTCACC GGCGCTGCGG GTGACCGGGC TGACGCGTGC CCCGGCTGTG
CGCGATGTGA GCTTTGACGT GGCGCCGGGG GAAATCTTTG GCATCGCGGG GCTGGTCGGC
GCGGGGCGCA CGGAACTGCT GCGACTGATC TTCGGTGCGG ACCGCGCGGA TGCGGGCAGC
GTCGAAGTCG GCTCGCCGCT GGCGCCAGTG CGCATCCGTT CGCCGGGCGA CGCGGTGCGC
CACGGCATCA GCCTGCTCAC CGAAGACCGC AAGGACGAAG GCCTGATGCT GAGCCTGCCC
ATCGCGACCA ACATCGCGCT GGGCAACATG CCAGGCGTAA CGAAGCGCGG CTGGCTGCAA
CCGGCACGCG AGCGGGTGCT GGCGCAGCGG CACATCGGCG CATTGCGCAT CCGTTGCGCT
GGGCCCGAGC AACCGGTCGG TGAACTCTCG GGCGGCAATC AGCAGAAGGT GGCGATTGCG
CGCTGGCTGG AGCGCGACAC GCCTGTGCTG CTCTTCGATG AGCCCACGCG GGGTGTGGAT
GTCGGCGCCA AGTTCGACAT CTATACGCTG CTCGACGCGC TGGCCGCGCG AGGCAAGGCG
CTGGTCGTGG TGTCGAGCGA TTTGCGTGAA CTCATGCAGT TGTGTGATCG CATCGGCGTC
ATGCGCGCCG GGCGGCTTAC GCACATCTTC CAACGCGGTG GCTGGAGCCA GGACGCCTTG
CTCGCCGCTG CCTTCGGTGA ATCGGAAGAA TCCGATTCAT ATGCACCTCA ATCACCCTCG
GAGACCGCCG ATGCGCTCTG A
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| Protein sequence | MSAAYEPRPP LLRVSAVSKH YAAPVLRDID LDVHAGEVLA LTGENGAGKS TLSKILCGLE
TATSGSMTLA GTLYAPDSRS AAEALGVRMV LQELSMVPTL TVAENLFLGE LPRRLGFVDR
SALRFRAEQA LARVGLDLDP WTPVHTLGIG HRQMIEIARA LASACRVLIL DEPTAMLSAH
ESATLFERID ALRREGVAII YISHRLDELA RIADRIVVLR DGKLVTDAPA ATVTQDALIQ
AMVGRDVAAS SETQRAAREP WLGDGSPALR VTGLTRAPAV RDVSFDVAPG EIFGIAGLVG
AGRTELLRLI FGADRADAGS VEVGSPLAPV RIRSPGDAVR HGISLLTEDR KDEGLMLSLP
IATNIALGNM PGVTKRGWLQ PARERVLAQR HIGALRIRCA GPEQPVGELS GGNQQKVAIA
RWLERDTPVL LFDEPTRGVD VGAKFDIYTL LDALAARGKA LVVVSSDLRE LMQLCDRIGV
MRAGRLTHIF QRGGWSQDAL LAAAFGESEE SDSYAPQSPS ETADAL
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