| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0877 |
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| Symbol | |
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| ID | 6286212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 929968 |
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| End bp | 932052 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624441 |
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| Product | putative site-specific recombinase transmembrane protein |
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| Protein accession | YP_001898459 |
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| Protein GI | 187927972 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4389] Site-specific recombinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.104417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT CTTTGCTCAA TCCGTGGCGC AAGTGGCGCG CTTCCCGGCA CGCCAGCCAT
CAACTCGATG CCATCCTGGC GCAGTTCGAG CCCACGCGCA GTCTGGCCGA GCGCAATGAA
TGGCTGATCG AGCTGGCTTA CTGGCTGCGT CGGGCGGACC GGCCAGCGGG GGCTGCGTCG
GAGTCCTGGC GTTATGCCCG TCTGCGTTAT CTGTTGCAGG TGCTGGAGAA CAATCCGGCC
CTGGCAGAAC GCGTCGGACA GGCATTGCGC AGCATCGTGC AAGACAACGA TCCGGTGTCG
CTGTTATGCG ATACGGGGTT GTCGTCACGC TCGGGTTTCT GGAGCGAGTT GGTCGACCGC
TGGCAGGCGC GCTGGCTGCC GCCCGCACCC AATCAGGCGC AACTGGCAAC GTTGTTTGCA
CTGCTGTTCG TGGGCCCGAC CGATGCGCAG TGGGTGGGTG GCCTTGACGA CGAACTGGTC
ACGCGCCTCC ACGCGCTGTT CCGTGCGGGG ATGACCGATG AGGAGCACGC AGCGGGCCAG
ACACGGTTGG AACGCAGCCT TGGCATCGGC ATCCAGATCC TGATCAGCCA GGTGCGTGCG
GCGGGTTTGT CGCGCGGTAT CCGCAGCCGC ATGGACCATG CGGAACTCAC CGATTCTCCG
TTCTATCTGC TCGCCGATGC GGCCAACGCG ATCTTCCTGG AACGGCCCGA CACGGCGCTT
GCGAGCCCCG AGCGTTTTGT GCAGGAACTC AACTATTTCC GCGCCGTGCT GGATCGATGC
CGCGCGGCTA CGGCCAGCGT GTATCAGCAT CTGGACGAGA ACGGCGTCTC GGTGGAGGTC
GTGTTTCAGG TCGAACGCAT GAAGGCGTGG CTGGGCCGCA TCGATCTGCT GCTCTCGGCG
TGGGCGGACA CGCAGGGCTC TCGCCGCTTC GTGCATATGA CGGCCGAGCT GGTGTCGGCC
AGCCAGCACC GCCGCAGCGT GGGGTATCTG ATCCGCTCCA CGTTTGCCGA TCTGGCGCGC
AAGGTGGTCG AGCGGTCTGC CGAGAGCGGG GAGCACTACA TTACGCGCGA CGGCAAGGAA
TACGGCGCGA TGGTCAAGGC GGCAGCCGGC GGTGGCGTCA TTACGGCGGC CACGGTGTAC
ATCAAGTTCT TCATCACGGG GGCGCATCTG TCGCGTTTTA CCGAAGGGCT GTTCGCGTCG
ATCAACTATG CGGTCAGCTT TCTCGGCATC CATTTCGCCC ATTTCACGTT GGCCACCAAA
CAGCCCGCCA TGACGGCGCC CGCGCTGGCG CACCGACTCG ACCAGGTCGG GCGCCAGGAA
GGGCTGGACC GCTTTGTCGA CGACACCGTC GCCATGATCC GCTCCAACGC GGCGGCGATT
GCAGGCAACC TGGCGGCCGT GGCGCCGGTG GCTTTCCTGG TGCAGTGGCT CGCCGGGCGT
TTCTTCCATA CGGATCTGAT CTCGGCAGCG AAGGCGATGG CGACCATCGA TTCGTTTTCG
ATCCTTGGGC CGACGCCGCT GTACGCGATC TTCACGGGCG TGTTGCTATG GGCCTCAAGC
CTGGCGGCGG GGTGGGCCGA CAACTGGTTT GCGCTGCACC GTGTGCATGA TGTGATTGCC
TACCACCGGC GCTTGCGCTT CATGGTCGGC ACGCAGGGCG CGCAGCGCAT TGCCAGCTTC
TGGAAGCGCA ATCTGTCGGG CATCGTCGCC AATGTGTCGC TGGGCTTCAT GCTGGGGCTG
GGGCCCGAGA TCCTGTCGTT CTTCGGACCG CATATGGAAG TGCGTCATGT CACGCTGTCG
ACGGGTGCGG TGGCAACCGC CGTGGGCGTA CTGGGCCCCA GCGTGATGCA CACGGCGCCG
TTCTGGCTGG CCGTGGCGGG CATTGCGCTG ATGGGCGTGC TGAACGTCCT GGTGTCGTTT
GCGCTGGCCT TCAACATGGC GATGCGCTCG CGCAACCTGC GCGGCGTCGA TCGCAAGCGA
GTGACGGGTG CCGTGTGGCG GCGCATCTTG CGGGATCCGC TTTGCCTGCT GGTACCGCGC
GCCCCGACCG CGAGCACGCC GCCCGGCACC AGTACGCCGG TCTAG
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| Protein sequence | MFDSLLNPWR KWRASRHASH QLDAILAQFE PTRSLAERNE WLIELAYWLR RADRPAGAAS
ESWRYARLRY LLQVLENNPA LAERVGQALR SIVQDNDPVS LLCDTGLSSR SGFWSELVDR
WQARWLPPAP NQAQLATLFA LLFVGPTDAQ WVGGLDDELV TRLHALFRAG MTDEEHAAGQ
TRLERSLGIG IQILISQVRA AGLSRGIRSR MDHAELTDSP FYLLADAANA IFLERPDTAL
ASPERFVQEL NYFRAVLDRC RAATASVYQH LDENGVSVEV VFQVERMKAW LGRIDLLLSA
WADTQGSRRF VHMTAELVSA SQHRRSVGYL IRSTFADLAR KVVERSAESG EHYITRDGKE
YGAMVKAAAG GGVITAATVY IKFFITGAHL SRFTEGLFAS INYAVSFLGI HFAHFTLATK
QPAMTAPALA HRLDQVGRQE GLDRFVDDTV AMIRSNAAAI AGNLAAVAPV AFLVQWLAGR
FFHTDLISAA KAMATIDSFS ILGPTPLYAI FTGVLLWASS LAAGWADNWF ALHRVHDVIA
YHRRLRFMVG TQGAQRIASF WKRNLSGIVA NVSLGFMLGL GPEILSFFGP HMEVRHVTLS
TGAVATAVGV LGPSVMHTAP FWLAVAGIAL MGVLNVLVSF ALAFNMAMRS RNLRGVDRKR
VTGAVWRRIL RDPLCLLVPR APTASTPPGT STPV
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