| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0876 |
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| Symbol | |
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| ID | 6286211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 927703 |
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| End bp | 929793 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624440 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001898458 |
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| Protein GI | 187927971 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.31229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TGAGCCAAGT CCCCAGCCCG CACGACGAGT CGAAGTTCGT GACTTTCGAG
GGCTCGCCGT TCCAGTTGTA CCAGCCGTAT CCGCCGGCCG GCGACCAGCC GGAGGCCATC
CGCCAGCTCG TCGAGAACAT TGGCGACGGC CTGTCGTACC AGACCCTCCT GGGTGTGACG
GGCTCGGGCA AGACATTCAC CATGGCCAAT GTGATCGCGC AGGTGGGTCG GCCGGCCATC
GTCTTTGCGC CCAACAAGAC GCTGGCGGCG CAGCTGTATT CCGAGTTCCG GGAGTTCTTC
CCGCGCAATG CGGTCGAATA CTTCGTCTCG TACTACGACT ACTACCAGCC TGAGGCCTAC
GTGCCGCAGC GCGACCTCTT CATCGAGAAG GATTCGTCGA TCAACGAGCA CATCGAGCAG
ATGCGGCTCT CCGCCACCAA GAGCCTGCTG GAGCGCCGCG ATGTGGTGAT CGTGGCCACC
GTCTCGGCCA TCTACGGTAT CGGCAATCCG AGCGAATACC ACCAGATGAT CTTGACGCTG
CGCGCGGGGG ACAAGGTCAG CCAGCGCGAC GTGATCGCGC GCCTGATCGC CATGCAATAC
ACACGCAACG AGACGGATTT CCAGCGCGGC ACCTTCCGCG TGCGCGGCGA CACGGTCGAC
ATCTTCCCCG CCGAGCATGC GGAAATGGCG GTGCGCCTGG AGCTGTTCGA CGACGAGGTC
GAATCGCTGC AGCTGTTCGA TCCGCTGACC GGCCGTGTGC GGCAGAAGAT TCCGCGCTTT
ACGGTGTACC CGTCGAGCCA CTACGTGACG CCGCGCGAAA CCGTGCTGCG CGCCATCGAG
ACCATCAAGG CTGAACTGCG CGAGCGGCTC GATTTCTTCT ACAAGGAAAA CAAGCTGGTG
GAAGCGCAGC GGTTGGAGCA GCGCACGCGC TTCGATCTGG AGATGCTGCA GGAGCTGGGC
TTCTGCAAGG GCATCGAAAA TTATTCGCGG CACCTTTCTG GCTCCGCGCC CGGCGAACCG
CCGCCGACGC TGGTCGACTA TCTGCCGCCC GATGCGCTGA TGTTCCTTGA TGAATCGCAC
GTGCTGATCG GCCAGCTCAA CGGCATGTAC AACGGTGACC GCGCGCGCAA GGAAACGCTG
GCCGAATACG GCTTCCGGCT GCCTTCTGCG CTCGACAACC GGCCGCTCAA GTTCGCCGAA
TTCGAGACCA AGATGCGGCA GGTTACCTTC GTGTCTGCCA CGCCGGGGGA TTACGAAAAG
AAGACCGCGG GCACGGAAGT CGTCGAGCAG GTCGTTCGAC CCACGGGCCT CGTCGACCCG
ATCATCGAGG TGCGCCCCGC CACGACGCAG GTCGACGATC TGCTGTCCGA GATCCATGTG
CGTGTCGAGG CCGGCGAGCG CGTGCTGGTG ACCACGCTCA CCAAGCGCAT GGCCGAGCAA
CTGACCGAGT TCCTGTCGGA GAACGGCGTC AAGGTCCGCT ACCTGCATTC GGACATCGAT
ACCGTGGAGC GCGTGGAGAT CATCCGTGAC CTGCGCCTGG GCACGTTCGA CGTGCTGGTT
GGCATCAACC TGTTGCGCGA GGGTCTGGAT ATTCCCGAAG TGTCGCTCGT GGCGATCCTG
GATGCGGACA AGGAAGGTTT CCTCCGTGCC GAGCGCTCGC TCATCCAGAC CATTGGCCGC
GCGGCGCGGA ACGTGAACGG CACCGCCATC CTGTATGCCG ATCGCATGAC CGATTCGATG
AAGAAGGCGA TTGGCGAGAC CGAACGCCGC CGCGCCAAGC AGATCGCCCA CAACGAGGCG
CATGGCATCA CGCCGCGCGG CGTTGTCAAA CGCATCAAGG ACATCATCGA CGGCGTGTAC
AACGTCGACG ATGCGCGCGC GGAACTGAAG GCCGCGCAAG AGGCCGCCAA GTACGAGGAC
ATGAGCGAGA AGCAGGCGTC CAAGGAAATC AAACGCCTGG AAAAACAGAT GCTCGACCAC
GCCAAGAACC TCGAATTCGA AAAGGCGGCG GCGGTGCGCG ATCAGCTTGC CAAGCTCAAG
TCGCAGCTCT TTGGAGCGAG CGGCGAAGAT CACATCGTTC CGGCCGCCTG A
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| Protein sequence | MTDLSQVPSP HDESKFVTFE GSPFQLYQPY PPAGDQPEAI RQLVENIGDG LSYQTLLGVT
GSGKTFTMAN VIAQVGRPAI VFAPNKTLAA QLYSEFREFF PRNAVEYFVS YYDYYQPEAY
VPQRDLFIEK DSSINEHIEQ MRLSATKSLL ERRDVVIVAT VSAIYGIGNP SEYHQMILTL
RAGDKVSQRD VIARLIAMQY TRNETDFQRG TFRVRGDTVD IFPAEHAEMA VRLELFDDEV
ESLQLFDPLT GRVRQKIPRF TVYPSSHYVT PRETVLRAIE TIKAELRERL DFFYKENKLV
EAQRLEQRTR FDLEMLQELG FCKGIENYSR HLSGSAPGEP PPTLVDYLPP DALMFLDESH
VLIGQLNGMY NGDRARKETL AEYGFRLPSA LDNRPLKFAE FETKMRQVTF VSATPGDYEK
KTAGTEVVEQ VVRPTGLVDP IIEVRPATTQ VDDLLSEIHV RVEAGERVLV TTLTKRMAEQ
LTEFLSENGV KVRYLHSDID TVERVEIIRD LRLGTFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNVNGTAI LYADRMTDSM KKAIGETERR RAKQIAHNEA
HGITPRGVVK RIKDIIDGVY NVDDARAELK AAQEAAKYED MSEKQASKEI KRLEKQMLDH
AKNLEFEKAA AVRDQLAKLK SQLFGASGED HIVPAA
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