| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0874 |
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| Symbol | |
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| ID | 6286936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 924692 |
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| End bp | 925963 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624438 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001898456 |
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| Protein GI | 187927969 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.275188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTACC AGCTTCACGA ATTCCAGCGC GCCCTGCTCA GCCCCATGAC AGCTTGGGCC
CAAGCGACTG CCAAGACCTT CACCAACCCA CTGAGTCCGC TGTCTCTGAT GCCCGGCGCA
CAACGCTACG CTGCGGGCTA CGAGCTGCTG TACCGCCTGG GCAAGGAGTA CGAGAAGCCA
GAATTCGGCA TCCGCTCCGT CAAATCCAAC GGCCGGGACA TTCCCATCGT CGAGCAGACC
ATCGTCGAGA AGCCGTTCTG CCGCCTGATC CGCTTCAAGC GCTACGCCGA CGACGCCGAG
ACCATCAAGC TGCTCAAGGA TGAACCGATC GTGCTGGTGT GTGCGCCGCT TTCGGGCCAC
CACTCCACGC TGCTGCGCGA CACCGTGCGC ACGCTGTTGC AGGATCACAA GGTGTACGTG
ACCGACTGGA TCGACGCTCG CATGGTGCCG ACCGAGGAAG GCGCCTTCCA CCTGTCGGAC
TACATCAACT ACATCCGCGA GTTCATCAAC CACATTGGCG CCGACAAGCT GCACGTGATC
TCGGTGTGCC AGCCGACCGT GCCCGTGCTG GCCGCCATCT CGTTGATGGC CTCGGACGGC
GAGAAGACGC CGCGCACGAT GACCATGATG GGCGGCCCGA TCGACGCCCG CAAGAGCCCG
ACCGCCGTCA ACTCGCTGGC GACCAACAAG GCGCACAGCT GGTTCGAGAA CAACGTGATC
TACACGGTGC CGGCCAACTA TCCGGGTCAT GGCCGCAAGG TGTATCCGGG CTTCCTGCAG
CACGCCGGCT TCGTAGCCAT GAACCCGGAC CGCCACCTGT CATCGCACTA CGATTACTAC
CTGAACCTGA TCGAGGGTGA CACGGAAGAC GCTGAGGCCC ACGTGCGCTT CTACGACGAG
TACAACGCCG TGCTGGACAT GGCCGCCGAG TATTACCTGG AGACCATCCG CGACGTATTT
CAGGAGTTCC ACCTGGCCAA CGGCACGTGG GTGGTAGAAG GCAAGCCGGT GCGTCCGCAG
GACATCAAGA GCACCGCGCT CTTCACCATC GAAGGCGAAC TGGACGACAT CTCCGGCAGC
GGCCAGACGG AAGCAGCGCA TGGCCTGTGC ACCGGCATCC CGAACGCGCG CAAGCAGCAC
CTGACGGCGC CCAAGTGCGG CCACTACGGC ATCTTCTCGG GTCGCCGCTG GCGCGAGCAG
GTATATCCGC AGTTGCGTGA TTTCATCCGC CGCTATGACG AGAATGCTCC TCGTATCAAG
GCTGTCGCCT GA
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| Protein sequence | MLYQLHEFQR ALLSPMTAWA QATAKTFTNP LSPLSLMPGA QRYAAGYELL YRLGKEYEKP
EFGIRSVKSN GRDIPIVEQT IVEKPFCRLI RFKRYADDAE TIKLLKDEPI VLVCAPLSGH
HSTLLRDTVR TLLQDHKVYV TDWIDARMVP TEEGAFHLSD YINYIREFIN HIGADKLHVI
SVCQPTVPVL AAISLMASDG EKTPRTMTMM GGPIDARKSP TAVNSLATNK AHSWFENNVI
YTVPANYPGH GRKVYPGFLQ HAGFVAMNPD RHLSSHYDYY LNLIEGDTED AEAHVRFYDE
YNAVLDMAAE YYLETIRDVF QEFHLANGTW VVEGKPVRPQ DIKSTALFTI EGELDDISGS
GQTEAAHGLC TGIPNARKQH LTAPKCGHYG IFSGRRWREQ VYPQLRDFIR RYDENAPRIK
AVA
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