Gene Rpic_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0873 
Symbol 
ID6286935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand+ 
Start bp923927 
End bp924622 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content63% 
IMG OID642624437 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001898455 
Protein GI187927968 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.326269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTC ACCCAGCCGC GCCACTCGCC GACATCGAAG CCGATGCTCA CGGCGGATCC 
GCCGCACCCC GCACGCGTCG CGACCCCGCC GGTACGCGCC GACGCATCCT TGCTGCTGCG 
ATCGAAGAGT TTGCGCGCGG TGGGTTTGCA GGCGCGCGCG TTGACGCCAT CGCCCGTCGC 
GCCGAGACCA ACGAGCGCAT GCTGTATTAC TACTACGGCA GCAAGGAAAA ACTCTTCCTG 
ACCGTGCTCG AGCACATGTA TTTCCGCTTC AAAGAGGCGG AAGAGCAGGT ACAGATCGAG 
TCGTCGGACC CGCGTGAGGC GGTCATCCAG CTTGCGCGGT TCGTCTGGGA TTTCTATTAC 
GAGAACCCCG AGTTCATCCG TTTGCTCAAC AGCGAAAACC TGCATGAGGC GCGGCATCTG 
AAGACGTCGC CACACCTCGT CGAGCTGGTC AACCCGGTCA TCGAGGTGCT GCGCGGCGTG 
GTGGAGCGCG GCCAGCGCAG CGGCATCTTT CGTGACGACA TCGATGTGTC GCGCCTGTAC 
CTCACGATTT CGGCGCTCGG CTATTACGTG CTGTCCAACC GCTACACGAT CAGTGCCGTG 
GTGGGCCGCG ACATTGCCTC GGCCGACGAG CACGAGGCGT TCGCACAGCT GCATATCAAG 
ATGCTGCTGG CGTATCTGGA GCGGCCCAAG GGCTGA
 
Protein sequence
MPSHPAAPLA DIEADAHGGS AAPRTRRDPA GTRRRILAAA IEEFARGGFA GARVDAIARR 
AETNERMLYY YYGSKEKLFL TVLEHMYFRF KEAEEQVQIE SSDPREAVIQ LARFVWDFYY 
ENPEFIRLLN SENLHEARHL KTSPHLVELV NPVIEVLRGV VERGQRSGIF RDDIDVSRLY 
LTISALGYYV LSNRYTISAV VGRDIASADE HEAFAQLHIK MLLAYLERPK G