Gene Rpic_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0872 
Symbol 
ID6286934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp922956 
End bp923786 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID642624436 
Productferredoxin 
Protein accessionYP_001898454 
Protein GI187927967 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.349751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCCT TGGTCCCCGC AGTGGCCGCA TCCTTGGCCG ACCGGCTCGA AAACCTCTTG 
CCGCAAACGC AATGCACCAA GTGCGGCTAC AACGGCTGCC GCCCCTACGG TGAAGCCATG
GCCAGCGGCG AGGCGCTACC CAACCGCTGC CCACCCGGCG GCGCGGAAGG CATTCGCCGG
CTGTCCGACG CACTTGGCTG CACGGGTGAC CTGCTCCCGC TGGACCCTTC CAACGGCATA
GAACAGCCTC GCGCCATCGC CGTCATCGAC CCGGAACGCT GCATCGGTTG CACGCTGTGC
ATTCAGGCGT GCCCGGTCGA CGCCATCGTG GGCGCGCCCA AGGCGATGCA CACGGTGCTG
GAGGACTGGT GCACCGGTTG CGACCTCTGC GTGCCCCCCT GCCCTGTCGA TTGCATCGAC
ATGATCCCCA TCACCGGCGA ACGCACGGGC TGGGATGCCT GGAGCCAGCA ACAGGCCGAT
GTCGCGCGGG ACCGCTACGT CTTCCGCAAC GCGCGCCTCA AGCGCGAACA AGCCGAGAAC
GAAGCGCGCC TCGCCGCCAA GGCAGCGGCC AAACTCGCTG CCCTCAGCGC TGAACAACCG
GCCGATGAGG CTGAGCTTGC CGCGCAGGCG CGCAAGAAGG CGATCATCCA AGCGGCCATT
GAACGGGCGC GCCAGAAGCA GGCCGAGATG GCTGCGCGCG GGCAAGGCCC GCGCAACGTG
ACCGACGTAT CGGCGGATGT GCAAGCCCAG ATTGACGAGG CTGAAGCCCG CCGCAAGCGC
ATCGCCAGCC AGATCGAACA CAGCGCCAAA CCCGACGCAG AAAAACCCTG A
 
Protein sequence
MVSLVPAVAA SLADRLENLL PQTQCTKCGY NGCRPYGEAM ASGEALPNRC PPGGAEGIRR 
LSDALGCTGD LLPLDPSNGI EQPRAIAVID PERCIGCTLC IQACPVDAIV GAPKAMHTVL
EDWCTGCDLC VPPCPVDCID MIPITGERTG WDAWSQQQAD VARDRYVFRN ARLKREQAEN
EARLAAKAAA KLAALSAEQP ADEAELAAQA RKKAIIQAAI ERARQKQAEM AARGQGPRNV
TDVSADVQAQ IDEAEARRKR IASQIEHSAK PDAEKP