Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0871 |
Symbol | |
ID | 6286343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 922297 |
End bp | 922941 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642624435 |
Product | endonuclease III |
Protein accession | YP_001898453 |
Protein GI | 187927966 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.348794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCG CCAAGCGCCA CGCCATCTTC GAGACACTGC GCGAAAACAA CCCGACGCCG ACCACCGAGC TGGAATACAC CACGCCGTTC GAGCTACTGA TCGCAGTGCT GCTGTCCGCA CAGGCGACCG ACGTGGGCGT GAACAAGGCG ACGCGCAAGC TGTTTCCGGT GGCCAACACG CCTGCCAAGC TGCTGGCGCT GGGCGAGGAA GGCATCACCG AATACATCAA GACCATCGGG CTGTATCGCA CCAAGTGCAA GCACATCCTG CAGACGTGCC GCATCCTGCT CGACCAGTAC GGCGGTGAAG TGCCGCGTGA GCGCGCTGCG CTAGAAGAGT TGCCCGGTGT GGGCCGCAAG ACAGCCAACG TGGTGATGAA CACGGCCTTC GGTGAGCCGA CGATCGCGGT GGACACGCAC ATCTTTCGCG TGGCCAATCG CACCGGGCTG GCGCCGGGCA AGAACGTCCT TGAGGTCGAG CTGAAGCTGC TGAAGGTGGT GCCGGAAGCG TTTCGGCAGG ACGCGCACCA CTGGTTGATC CTGCATGGAC GCTATGTGTG CAAGGCGCGC AAACCCGAGT GTTGGCATTG CGCCATCGAG CCGCTGTGTG AATTCAGGCC GAAGACGCCA GCGCCGAAGG AATAA
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Protein sequence | MNSAKRHAIF ETLRENNPTP TTELEYTTPF ELLIAVLLSA QATDVGVNKA TRKLFPVANT PAKLLALGEE GITEYIKTIG LYRTKCKHIL QTCRILLDQY GGEVPRERAA LEELPGVGRK TANVVMNTAF GEPTIAVDTH IFRVANRTGL APGKNVLEVE LKLLKVVPEA FRQDAHHWLI LHGRYVCKAR KPECWHCAIE PLCEFRPKTP APKE
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