Gene Rpic_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0848 
Symbol 
ID6289632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp900301 
End bp901239 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID642624412 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_001898430 
Protein GI187927943 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0199053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.550765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT CCGCCGCCCT CCCCATGCAA CACGCCGACC ACGCCGAACG CCGGGGCTTG 
CTGCTCGGCC TCATCGGCGT GGCCATCTTT AGCCAGACGC TGCCGTTCAC GCGCATGGCC
GTGGCCGAGC TGGATGCGAC CTTCGTGGCG CTGGCGCGCG CGGTGCTGGC GAGTGTGCTG
GCGCTGGCGA TGCTGGCGGC CACGGGCGCG TTCTCCGCCG CCAAACGCCC GCGCGGCCAT
CAATGGTGGC AGCTGGCGGT GACGGCAATG GGCGTGGTGG TCGGCTTTCC GCTGTTCTCC
TCGCTGGCGA TGCGAGACGT ACCGGCCGCC CATGGCGCCA TCATCACCGG CCTGCTGCCG
CTTGCGACCG CCATCTTCGC CGCCTGGTTC GGGCGCGAGC GGCCGTCTGC CGGGTTCTGG
CTGTGTGCGC TGGCGGGCAG TGTGCTTGTC GTCTCCTTTG CGCTGCTGCA AGGCGCGGGG
AGCCTGCATC GCGCCGATTG GCTCCTCTTC GCCGCCATGG TGACCGGCGC GCTCGGCTAT
GCAACCGGCG GCAAGCTCGC GCGAGAACTG GGCGGCACGC AGACGATTGC CTGGGCGCTG
ATCGTCTCCC TGCCTGTGCT TCTGCCCCTG GTGAGCGCGC TGGTGTGGCT GCCGTCGACC
CATCAGGCCG AGGCGCTGGC GCATGCGTCG TCCCGCGCCT GGATGGGGCT AGCTTACGTG
TCGGCCTTTT CCATGTTCAT CGGCTTCCTG TTCTGGTACT CCGGCCTGGC CGCCGGCGGT
GTTGCGCGGG TCGGGCAGAT ACAATTGCTG CAACCTTTCA TGACGTTGAT CGGCGGCTGG
CTGCTGCTGG GTGAATCGCT TGACGCGCCC ACCGTGTTGT TTGCGCTGGC TGTGATTGCC
GTGGTCGGCA TCGGCCGGCG AACGTCGGTA CGCCGATAG
 
Protein sequence
MNKSAALPMQ HADHAERRGL LLGLIGVAIF SQTLPFTRMA VAELDATFVA LARAVLASVL 
ALAMLAATGA FSAAKRPRGH QWWQLAVTAM GVVVGFPLFS SLAMRDVPAA HGAIITGLLP
LATAIFAAWF GRERPSAGFW LCALAGSVLV VSFALLQGAG SLHRADWLLF AAMVTGALGY
ATGGKLAREL GGTQTIAWAL IVSLPVLLPL VSALVWLPST HQAEALAHAS SRAWMGLAYV
SAFSMFIGFL FWYSGLAAGG VARVGQIQLL QPFMTLIGGW LLLGESLDAP TVLFALAVIA
VVGIGRRTSV RR