Gene Rpic_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0847 
Symbol 
ID6286905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp899785 
End bp900255 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID642624411 
ProductEndoribonuclease L-PSP 
Protein accessionYP_001898429 
Protein GI187927942 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00708228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.528275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CGCACGACGC TCAGGCCAAG CTCAAGCAAC TCGGCATCGA ACTGCCTGCC 
GCTGGCGCCC CCGCTGCCGC CTACGTCATG GCCGCGCAAA CCGGCAATCA GGTCTTCCTG
TCCGGCCACA TCGCCAAGAA AGACGGCAAG CCGTGGGTTG GCAAGCTGGG CGCCGACATG
ACCACCGAGC AAGGCAAGGC AGCGGCACGG GCCATCGCCA TCGACCTGAT CGCCACGCTG
AACACGCACC TGGGCGGTGA CCTCAGCCGC GTCAAGCGCA TCGTCAAGGT GATGAGCCTG
GTCAACTCCA CGCAGGAGTT CACTGAGCAG CACCTGGTGA CCAACGGCGC ATCGGAACTG
TTTGCCGACG TATTTGGCGA CGCCGGCAAG CACGCCCGCA GCGCCTTCGG CGTCGCACAG
ATTCCGTTCG GCGCGTGCGT CGAGATCGAG CTGATTGCGG AAGTCGCCTG A
 
Protein sequence
MTASHDAQAK LKQLGIELPA AGAPAAAYVM AAQTGNQVFL SGHIAKKDGK PWVGKLGADM 
TTEQGKAAAR AIAIDLIATL NTHLGGDLSR VKRIVKVMSL VNSTQEFTEQ HLVTNGASEL
FADVFGDAGK HARSAFGVAQ IPFGACVEIE LIAEVA