| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0830 |
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| Symbol | |
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| ID | 6289027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 876143 |
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| End bp | 877033 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624394 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001898412 |
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| Protein GI | 187927925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0921738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTT TCGTACGTTT CGCATTCGCA TTGACGGCGC TGGCCTTGTT GGCCAGCCAG
CCGGCGCGCG CGGACGTCTA CGGCTACATC GATGAAAACG GTCTGGCGCA CTTCGCTGCC
GAGCGGATAG ACGATCGCTA CGTGCTGTTC ATGAAGGGCG TGGCGGTGGC GGGCAAGGGC
GACGACAAGG CCAAGGACGA TAGCGCCATC GCCCTGCCGG CAACCGAGCT GCCCGACGCC
GACGCCTATC TCAACGCCAG CAAGCGCGAT GCACTCGACA ACGCTGCCGG CATGCGCCAG
CGCCTGGTGC GCGCGGTGTT GCAGCATCCG AACGTGCCGA CGGTGGAACC GCTGATCCGC
CAGGCCGCGA GCAAGCACGG TATCGACCCC GCGTTGGTGA AAGCCGTTAT TGCCGCCGAA
TCCGGTTTCA ACCCGCAGGC CGTGTCGCCC AAGGGTGCAA TCGGGCTGAT GCAGGTGATT
CCGGACACCG GCGCGCGCTA CGGCGTGACC GGCGACGCCC GCCGCACGGC CGCCCAGAAG
CTGGCCGACC CGAAGACCAA CATCACCACC GGCGTGCGTT ACCTGAGCGA TCTGCTGCGC
ATGTTCTCAG GCAACCTTGA GCTTGTGCTG GCCGCCTACA ACGCGGGCGA GGGCGCCGTG
CAGAAGCACG GCAACGACAT TCCGCCCTAC GCCGAGACGC AGAACTACGT GAAGACGGTG
CTGCAGTTCT ATCGCTACTA CAACCCGGTC GCCGCCGTGC CCGGATTCAT GAATGTGAGC
GCCAACGGCG TCATCGCCAC GCGCAAGCCG GGCCGCACGG GCCGGCCCGC ACGCATCGAA
CTCGTATTGG ACCCGGCCAC CGGCGTGGCC ACGAACGTAC CTCAACATTG A
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| Protein sequence | MKLFVRFAFA LTALALLASQ PARADVYGYI DENGLAHFAA ERIDDRYVLF MKGVAVAGKG
DDKAKDDSAI ALPATELPDA DAYLNASKRD ALDNAAGMRQ RLVRAVLQHP NVPTVEPLIR
QAASKHGIDP ALVKAVIAAE SGFNPQAVSP KGAIGLMQVI PDTGARYGVT GDARRTAAQK
LADPKTNITT GVRYLSDLLR MFSGNLELVL AAYNAGEGAV QKHGNDIPPY AETQNYVKTV
LQFYRYYNPV AAVPGFMNVS ANGVIATRKP GRTGRPARIE LVLDPATGVA TNVPQH
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