Gene Rpic_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0818 
SymbolthyA 
ID6286502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp861159 
End bp861953 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID642624381 
Productthymidylate synthase 
Protein accessionYP_001898400 
Protein GI187927913 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT ATCTCGACCT GATGCGCCAT GTCTACGAAC ATGGCACCGA CAAAGCCGAC 
CGCACCGGCA CCGGCACGCG TTCCGTGTTC GGCCACCAGA TGCGCTTCAA CCTGCAGGAC
GGCTTCCCGC TGGTGACCAC CAAGAAGGTG CACATCAAGT CCATCGTCTA TGAACTGCTG
TGGTTCCTCC AGGGCTCGAC CAACGTGCGA TGGCTGCAAG ACAACGGCGT GACGATCTGG
GACGAATGGG CCGACGCCGA CGGCGAACTT GGCCCCGTCT ACGGCTCCCA ATGGCGCTCG
TGGCCGACGC CCAACGGCGA ACATATCGAC CAGATCGCCG AGCTGATTGC CCAGATCAAG
CGCAACCCCG ATTCGCGCCG GCTGATCGTG TCTGCCTGGA ATGTGGCCGA CATCCCGCGC
ATGAAGCTGC CGCCCTGCCA TGCGTTCTTC CAGTTCTATG TGGCCGACGG CAAGCTGTCG
TGCCAGCTCT ACCAGCGCAG CGCCGATATC TTCCTCGGCG TGCCGTTCAA CATTGCCAGC
TACGCGCTGC TCGTGCACAT GGTTGCGCAA CAGACTGGCC TCGATGTGGG CGATTTCGTC
TGGACTGGCG GCGATTGCCA CCTCTATAAC AACCATTTCG AACAGGTCCA GACGCAACTC
GCGCGCGAAC CGCTGCCGTT GCCGAAACTG ATCATCAAGC GCAAGCCTGA AAGCATCTTC
GACTACCAGT ACGAGGACTT TGAGATCCTC GGCTACCAGA GCCACCCCGC GATCAAAGCA
CCGGTGGCTG TGTAA
 
Protein sequence
MKPYLDLMRH VYEHGTDKAD RTGTGTRSVF GHQMRFNLQD GFPLVTTKKV HIKSIVYELL 
WFLQGSTNVR WLQDNGVTIW DEWADADGEL GPVYGSQWRS WPTPNGEHID QIAELIAQIK
RNPDSRRLIV SAWNVADIPR MKLPPCHAFF QFYVADGKLS CQLYQRSADI FLGVPFNIAS
YALLVHMVAQ QTGLDVGDFV WTGGDCHLYN NHFEQVQTQL AREPLPLPKL IIKRKPESIF
DYQYEDFEIL GYQSHPAIKA PVAV