| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0816 |
|---|
| Symbol | |
|---|
| ID | 6287163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 859213 |
|---|
| End bp | 860586 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624379 |
|---|
| Product | peptidase U62 modulator of DNA gyrase |
|---|
| Protein accession | YP_001898398 |
|---|
| Protein GI | 187927911 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAA CGCTCGATTC CAAGACCGCC CCTGTGTTTG CCTACCGCCG CGAACAGCTC
GAGGAGATGG CCTCCGATGT GCTGCGCATT GCACGCGAAC TCGGCGCCTC TGATGCCGCA
ACGGAAATCT CCGAAGGCCA GGGCCTGTCG GTCACGGTGC GCAAGGGCGA GATCGAGACC
ATCGAGCAGA ACCGCGACAA GATTGTTGGC GTGACCGTCA TGCTGGGCAA GAAGCGCGGC
AACGCCAGCA CGTCGGACTT TTCGCCGGCA GCACTGCGGT CCACCGTCGA GGCCGCCTAC
AACATCGCGC GCTTCACAGC CGACGATGAT TGCGCCGGCT TGGCAGAAGA AGAACTGCTG
GAGAAGCACC CGCGAGACTT GCAGCTCTAT CACCCATGGA TGATCGACGC CGAAGCCGCC
GTGGAGATCG CGCGCGCCGC TGAAGCCGCT GCCTTTGCCG TGAGCCCAAA GATCCGCAAC
AGCGATGGTT CCAGCATCTC TGCCCAGCAT TCGCACTTCG TGTTGGCCAC GTCGCGCGGT
TTCATGGCGG GCTACCCGTA TTCGCGTCAC TTCATTTCCG CCGCGCCGAT CGCCGGTTCG
GGCGCGCATA TGCAGCGCGA TGATTGGTAC TCGTCCAAGC GCTCGCCGGA CGATCTGGCC
GCGCCGGAAG CGATCGGCAA GTACGCGGCG GAACGCGCGC TGGCGCGTTT GTCCGCGCGC
CGGTTGACGA CCCGCAAGTG CCCGGTGTTG TTTGAGGCGC CGCTGGCTGC GGGTTTGCTG
GGCGCGTTCG TGCAGGCCGT GTCGGGAGGC GCCTTGTACC GCAAGTCGAC GTTCCTGCTC
GATACGCTGG GCAAGGAAGT GTTCGCGCCG CATGTGCAGA TCAAGGAAGA CCCGCATGTT
CTCAACGGGA TGGGCAGCGC GCCCTTCGAC GAGGAAGGCG TACGCACGCA GCGCCGCGAT
GTGGTGAAGA ACGGCGTGGT GGAGGGCTAC TTCCTGTCGA CGTATTCCGC GCGCAAGCTC
GGCATGCAGA CTACTGGCAA CGCGGGCGGC TCGCATAACC TGACGCTGTT CTCCAACAAA
ACGACCGCCG AAGATGACTT TGCCGGCATG CTGCGCCGCA TGGGCACGGG TCTGCTCGTG
ACCGAACTGA TGGGCCAGGG CGTGAACTAT GTGACGGGCG ACTATTCGCG CGGCGCGTCG
GGCTATTGGG TGGAGAACGG CGTGATTCAG TATCCGGTGG AAGAGATCAC GATTGCCGGC
AACCTGGGCG AGATGTTCCG CCAGATTGTC GCCATCGGCG CGGATGCGCT AGTGCGCGGC
ACGAAGGAAA CCGGCTCGAT CCTGATCGAA CAGATGACAA TTGCCGGCGA ATAA
|
|---|
| Protein sequence | MSQTLDSKTA PVFAYRREQL EEMASDVLRI ARELGASDAA TEISEGQGLS VTVRKGEIET
IEQNRDKIVG VTVMLGKKRG NASTSDFSPA ALRSTVEAAY NIARFTADDD CAGLAEEELL
EKHPRDLQLY HPWMIDAEAA VEIARAAEAA AFAVSPKIRN SDGSSISAQH SHFVLATSRG
FMAGYPYSRH FISAAPIAGS GAHMQRDDWY SSKRSPDDLA APEAIGKYAA ERALARLSAR
RLTTRKCPVL FEAPLAAGLL GAFVQAVSGG ALYRKSTFLL DTLGKEVFAP HVQIKEDPHV
LNGMGSAPFD EEGVRTQRRD VVKNGVVEGY FLSTYSARKL GMQTTGNAGG SHNLTLFSNK
TTAEDDFAGM LRRMGTGLLV TELMGQGVNY VTGDYSRGAS GYWVENGVIQ YPVEEITIAG
NLGEMFRQIV AIGADALVRG TKETGSILIE QMTIAGE
|
|---|
| |