Gene Rpic_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0808 
Symbol 
ID6288471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp852803 
End bp853507 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID642624371 
ProductNUDIX hydrolase 
Protein accessionYP_001898390 
Protein GI187927903 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.655823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTC CCGTGTTCGA CCCTGAGCAG TTACCGGTGG TGCCGACCGA GGCATCATTG 
CCGGCGCTCG GGCTCCCGCG GCTGACCGCC GAGTTCGTGC GCGAGCGGCT GCAGACGCAG
CCCGACTGGC AACCGGAACA GACGGACGAA TCCCGCCTGA TCGACGCTTC GCTCAAGTTG
CGCGAGGCGG CGGTGCTGGT GCCGCTGGTG CAGCGCGAGG CGGGTCTGAC GGTGCTGCTG
ACGCAACGCA ATGCATCGCT TAGCCAACAT GCCGGCCAGG TCAGCTTTCC GGGCGGTGGA
CGCGAAGAAT TTGACCGTGA CATGGTCGAC ACGGCGCTGC GCGAGACGAT GGAAGAGGTC
GGCATTAGTG CCGAACACAT CGAAGTGATC GGTCGCTTGC CCGACTACAT CACCGGGACC
GGTTTCCATG TGAGCCCAAT TGTCGGATTG CTCGCGCCCG ATTTCACGCT GCAACCCGAC
CCAAGTGAAG TGGCGGAGGT GTTTGAAGTG CCGCTGGCCT TTTTGATGGA TCCGGCCAAC
CACGAAGTGC GCGAGCTGCG GTGGGAAGAC CGCGTGCGTC GTTTCTATGC GATGCCTTAC
CGGCGATCTG GGCGATCTGA CCAAGCGCCT GACTCTGGCC ACCACTTCAT CTGGGGCGCG
ACGGCGGGCA TGCTGCGCAA CCTGTATCAC CTGCTGGCAG CGTAG
 
Protein sequence
MRRPVFDPEQ LPVVPTEASL PALGLPRLTA EFVRERLQTQ PDWQPEQTDE SRLIDASLKL 
REAAVLVPLV QREAGLTVLL TQRNASLSQH AGQVSFPGGG REEFDRDMVD TALRETMEEV
GISAEHIEVI GRLPDYITGT GFHVSPIVGL LAPDFTLQPD PSEVAEVFEV PLAFLMDPAN
HEVRELRWED RVRRFYAMPY RRSGRSDQAP DSGHHFIWGA TAGMLRNLYH LLAA