| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0806 |
|---|
| Symbol | trmD |
|---|
| ID | 6288469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 851448 |
|---|
| End bp | 852236 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642624369 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_001898388 |
|---|
| Protein GI | 187927901 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCG ACGTCGTCTC GCTGTTTCCG GACATGTTCC GGGCGCTGAC GGACTGGGGT
ATCACCAGCC GCGCAGCCAA ACAGCAGGTG TACACGTTGC GCACCTGGAA CCCGCGCGAT
TTCACGACGG ACAACTACCG CACCGTGGAC GACCGCCCGT ACGGCGGTGG CCCGGGCATG
GTGATGTTGG CGAAGCCGCT AGAGGCCGCG CTGGATGCGA TTCAAGCGGC GCAAGCGCCG
GCGGCTTCGC ATGTGGTGTT GCTGTCGCCG CAAGGCAAGC CGCTCACGCA CAAGCGGGTG
ATGGAACTGG CGCAGTTGCC GGCGCTCACG TTGCTGTGCG GACGCTACGA AGCGATTGAT
CAACGTCTGG TCGACCGCCG CGTGGATGAG GAAATCAGCC TTGGCGATTT CGTCCTCTCC
GGCGGTGAGA TTGCAGCAAT GGCGATCATC GACGCCGTGG TGCGGCAGTT GCCCGGCGTG
CTGGGCGATG CACAGTCGGC GGTGCAAGAC AGTTTCGTCA ACGGCTTGCT CGACTGCCCG
CACTACACGC GGCCGGAAGA GTACGAAAGT GTGCGTGTGC CCGATGTGCT GCTGGGTGGC
CACCATGCCG AGATCGAGAA ATGGCGCCGC CAGCAGGCGC TGGTGAACAC GATGCGCAAG
CGGCCCGATC TGATCGAGGC GGCGCGCAAG CAGGGTTTGT TGTCCCGCAG CGATGAGGTC
TTCCTCGCTG CCGCGGCGAT AACGGCAAAG GGGTCAGAGC CTTCCATACC GGAAGGCTCG
GCCAAGTGA
|
|---|
| Protein sequence | MQFDVVSLFP DMFRALTDWG ITSRAAKQQV YTLRTWNPRD FTTDNYRTVD DRPYGGGPGM
VMLAKPLEAA LDAIQAAQAP AASHVVLLSP QGKPLTHKRV MELAQLPALT LLCGRYEAID
QRLVDRRVDE EISLGDFVLS GGEIAAMAII DAVVRQLPGV LGDAQSAVQD SFVNGLLDCP
HYTRPEEYES VRVPDVLLGG HHAEIEKWRR QQALVNTMRK RPDLIEAARK QGLLSRSDEV
FLAAAAITAK GSEPSIPEGS AK
|
|---|
| |