| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0796 |
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| Symbol | |
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| ID | 6288749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 842935 |
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| End bp | 844224 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624360 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001898379 |
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| Protein GI | 187927892 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.661102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGC TCGTTCTTGG CAGCGGCGTG ATCGGCGTGA CGAGCGCCTA TTACCTGGCC
CGTGCGGGCC ATGAAGTCAC TGTCGTCGAC CGCGAAGCGG GTCCGGCGCT GGAGACGAGC
TTCGCCAATG CTGGCCAGAT CTCGCCGGGC TATGCGTCGC CGTGGGCCGC GCCTGGCGTA
CCGCTCAAAG CCATCAAATG GATGTTCCAG CAGCACGCGC CGCTTTCCAT CCGCCCCGAC
GGCACGCTCT TCCAGCTCAA GTGGATGTGG CAGATGCTGC GCAACTGCGA CGCCGCCAGC
TACGCGCAAA ACAAGGAACG CATGGTTCGC CTGGCCGAGT ACAGCCGCGA CTGCATCCGC
GACCTGCGCG CCGACACCGG CATCGCCTAC GAAGGCCGCC AGCAAGGCAC GCTGCAAATT
TTCCGCACCC AGCAACAGCT CGACGGCGCC GCGAACGACA TCGCCGTGCT CGAGCGCGCC
GGCGTGCCGT ACGAACTGCT TTCGCGCGAA GACCTCGTGC GCAGTGAACC GGGCCTGGCC
TCGACCCGCC ACAAGCTGGC CGGTGGCTTG CGCCTTCCCA ATGACGAAAC GGGCGATTGC
CAGCTCTTCA CCACGCGCCT GGCCGCGATG GCGGAAAAGC TCGGCGTGCG CTTCCGTTTC
AACAGCACGA TCAACAGCCT CATCTTCAAG AACGACGCCG TCCGCGGGGC GCTGGTCGAC
GGCCAGCCGA TCGACGCCGA TCTCGTGGTC GTGGCGCTGG GCAGCTACAG CACACCGTTC
CTGAAGAACC TGGTGAACGT GCCGGTCTAC CCGCTCAAGG GTTTCTCGAT CACCGTACCG
ATGACAGATG CGGGGAAGAG CCCCGTATCC ACCATCCTGG ACGAGACCTA CAAAGTGGCC
GTGACGCGCT TTGACGACCG AATCCGCGTG GGCGGCATGG CGCAGATTGT CGGCTACGAC
AAGCGCCTCG ACCCAGGCAA GCGCAAGACG CTGGAGTTCG TGGTCAACGA TCTGTTCCCG
GGTGCCGGGG ATGTCTCGCG CGCGACGTTC TGGACCGGCC TGCGCCCGAT GACGCCGGAC
GGCACGCCCA TCGTGGGCCA GACGCCCGTG CGTGGCCTGT GGCTCAACAC TGGCCACGGC
ACGCTGGGTT GGACCATGGC CTGCGGCTCG GGCAAGCTGC TGTCGGATCT GGTGTCGGGC
CGCTCGCCTG CCATCCGCTC GGATGACCTT TCTGTGTATC GCTACCTGGG TGGCACCCAG
ATGCCGGCAA CCAAGCCTGC GCTGGCCTGA
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| Protein sequence | MRVLVLGSGV IGVTSAYYLA RAGHEVTVVD REAGPALETS FANAGQISPG YASPWAAPGV
PLKAIKWMFQ QHAPLSIRPD GTLFQLKWMW QMLRNCDAAS YAQNKERMVR LAEYSRDCIR
DLRADTGIAY EGRQQGTLQI FRTQQQLDGA ANDIAVLERA GVPYELLSRE DLVRSEPGLA
STRHKLAGGL RLPNDETGDC QLFTTRLAAM AEKLGVRFRF NSTINSLIFK NDAVRGALVD
GQPIDADLVV VALGSYSTPF LKNLVNVPVY PLKGFSITVP MTDAGKSPVS TILDETYKVA
VTRFDDRIRV GGMAQIVGYD KRLDPGKRKT LEFVVNDLFP GAGDVSRATF WTGLRPMTPD
GTPIVGQTPV RGLWLNTGHG TLGWTMACGS GKLLSDLVSG RSPAIRSDDL SVYRYLGGTQ
MPATKPALA
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