| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0789 |
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| Symbol | |
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| ID | 6286489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 835373 |
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| End bp | 836296 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624353 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_001898372 |
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| Protein GI | 187927885 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.384272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCG GCCTCTATAC GCATCCCGAA TTCCTCCGGC ACGAGATGGG ACCGCACCAT
CCCGAATGTC CGGATCGCCT GCGCGCGATC GAAGACCAGC TCATCGCCAG CCGCATCGAC
GACCTGCTCG TTCCCTGCGA GGCGCCGCCC GCCACCGAGG CGCAGCTGTG CCGCGTCCAT
CGCGCCGAAT ACGTGCGCGA ACTGGTGGCC AGTGTGCCGA TCGCCGGCTA TATGCCGATT
GATCCCGACA CCTCGATGAA CCCGCACACC TATATGGCTG CGGTGCTGGC CGCAGGTGCC
GCGGTGGACG CCACCGACAA GGTCATCGCC GGCGAGCTGG AGAACGCCTT CTGCAGCGTG
CGCCCACCGG GCCATCATGC GGAGCCGGGC CGTGCGATGG GCTTCTGCTT CTTCAACAAC
GTGGCCGTGG CCGCACGTCA TGCGCTTGAT CATCACGGCC TGCAGCGCGT GGCGATCGTC
GACTTTGATG TGCACCATGG CAACGGCACC GAAGCGGCCT TCCGCGATGA GCCCCGCGTG
CTGATGTGCA GCATCTTCCA GCACCCGTTC TATCCGTATT CCGGCACCGA GCCGGTGGCG
GCCAACATGG TGAACATCCC GTTACCGGCG TACACCAATG GCCTGACCGT GCGGGAGGTG
GTGGAAACCA TCTGGCTGCC ACGCCTGGAG GCGTTCCAGC CCGAGATGCT GTTCATCTCT
GCGGGCTTCG ATGCGCACCG CGAAGATGAT CTGGGCCAGA TGGGCTTGGT CGAGGCAGAC
TACACCTGGA TCACGCAGCA GCTCATGCAA GTGGCGCGCA CGCACGCCAA GGGCCGCATC
GTCAGTTGTC TTGAGGGCGG CTACAACCTC AGTGCGCTTG GCCGCAGCGT GGTGGCGCAC
GTCAAGGCGC TTGCCGAGCT TTAG
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| Protein sequence | MATGLYTHPE FLRHEMGPHH PECPDRLRAI EDQLIASRID DLLVPCEAPP ATEAQLCRVH
RAEYVRELVA SVPIAGYMPI DPDTSMNPHT YMAAVLAAGA AVDATDKVIA GELENAFCSV
RPPGHHAEPG RAMGFCFFNN VAVAARHALD HHGLQRVAIV DFDVHHGNGT EAAFRDEPRV
LMCSIFQHPF YPYSGTEPVA ANMVNIPLPA YTNGLTVREV VETIWLPRLE AFQPEMLFIS
AGFDAHREDD LGQMGLVEAD YTWITQQLMQ VARTHAKGRI VSCLEGGYNL SALGRSVVAH
VKALAEL
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