| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0788 |
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| Symbol | |
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| ID | 6286488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 834117 |
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| End bp | 835241 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624352 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001898371 |
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| Protein GI | 187927884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.297958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT CGCCTTCTTC CCGACGTCCC GTATTGCGCG CCCTGGTGGC TGGCGCAGCG
CTCTCCGCGC TCTCTTTCCC GGCGCTCTCG CTGGCTGCCA AGAAGACCGC CAAATCGCCC
AAGCGCCGCG TCGCGGTGCA TGAAGAAGAG ATCGACCCCG ATCGTTATCG CAACAACCCG
CAAACGCAGG CCTTCATCGG CATGCTGGTC GCGCAGTACA ACTTTGACCG GACATCGCTC
GAAACGCTGT TTGCGGGCAC GGCCTATTCC GCCACGGTGG CCCGCCTGAT CCTGCCGCCG
GCCACGCCCG CGCGTCGCAG CTGGACGGCC TATCGCGGCC GCTTCATCGA GCCGATCCGC
ATCGGCGCCG GCGTGCGGTT CTGGCAGCAA TACGGCGACA CACTGCGCCG CGCCGAGAAC
GAATTCGGCG TGCCGGCCGA TGTGATCGTG GGCATCCTGG GCGTGGAGAC CATCTACGGC
CGCGACATGG GCAACTTCCG CGTAATGGAC GCGCTGTCCA CGCTGGCCTT CGACTACCCC
GACACGCCCA ACCGCGAAGA CCGCAGCACG ATGTTCCGCA ACCAGCTCAA GGACTTCCTG
CTCTGGTGCC GTGACACGGG CACGGAGACG TTCTCGGTCC TGGGCTCGTA CGCGGGCGCA
GTCGGTATTC CGCAATTCAT GCCGACCAGC ATCCGCGAAT ACGCCATCGA TTACGACCAC
GACGGCCACA TCGACCTGCG CAACAGCGCG GTGGATGCCA TCGGCAGCGT TGCCCGCTTC
CTGCAGATGC ACGGCTGGGA GCCAAACCGC CCGGTGATGT GGAACATTGC CGGCGATGCC
GACAGCCAGG GCATTGCGGC CGCCGCCGCA GATGGCCAGC CGTATCCCGG CATGACGTTG
TCCAGGCTCA CACGCGCTGG TCTGGCATTG GCTCCGGGTG TGGATACCGC GCGCGAGCAA
GAAACCGAAG TGCTGATGAT CGATCTGCCC ACGCCCGGCC AACCGACGGA ATACCGCGTG
GGGCTGCGCA ACTTCTACGT GCTCACACGC TATAACCGCA GCTTCTTCTA TGCCGCCGCG
GTGTACGAGT TGGGCCAGGC CGTGCGGCAG GCGATGCAGG GTTGA
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| Protein sequence | MSQSPSSRRP VLRALVAGAA LSALSFPALS LAAKKTAKSP KRRVAVHEEE IDPDRYRNNP
QTQAFIGMLV AQYNFDRTSL ETLFAGTAYS ATVARLILPP ATPARRSWTA YRGRFIEPIR
IGAGVRFWQQ YGDTLRRAEN EFGVPADVIV GILGVETIYG RDMGNFRVMD ALSTLAFDYP
DTPNREDRST MFRNQLKDFL LWCRDTGTET FSVLGSYAGA VGIPQFMPTS IREYAIDYDH
DGHIDLRNSA VDAIGSVARF LQMHGWEPNR PVMWNIAGDA DSQGIAAAAA DGQPYPGMTL
SRLTRAGLAL APGVDTAREQ ETEVLMIDLP TPGQPTEYRV GLRNFYVLTR YNRSFFYAAA
VYELGQAVRQ AMQG
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