Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0758 |
Symbol | |
ID | 6286392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 796644 |
End bp | 799100 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642624322 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_001898341 |
Protein GI | 187927854 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0350969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGC ATTTCCTTCT TGCCGCCGTG CTGTCCGTGG CGTTGCCTGC TCAAGCCGAG CTTCTCATCA GCGAGTACGT AGAAGGCAGC TCGAACAACA AGGCCATCGA AATCTACAAC CCGGACGGCG CCGAAGCCGA TCTGTCGGTC TACAAGATCG AGCAGTACAA CAATGGCGCC AGCACGCCCA CCGCGTCGTT TGCGCTCTCG GGCAAGCTGG CGCCAGGCGC CGTCCATGTG ATGGCCCACA GCACACTGGC CAGCGTGCTC GGCAGCCGCG TCAACCAGAC CGCGGCGTTC TCCTTCAACG GCGACGATGC GCTGAGACTG ACGCGCTCCG GCGTTGTTGT CGACCGCATC GGCCAGGTTG GCTATCAACC GCCGTCCGGC TTCTGGGGTA CAGCCAGCGC CGGCACCAAG GACCACACGC TGCGCCGCCA AGGCACGGTG AAGGCGGGCG ACACGGACAG CACAGCTGCC TTCAATCCAT CCCTTCAGTG GGATGCCTTC AATATCGACG ACTTCTCCGA CCTTGGCCTG TACAACGGGC AGGGCACCGT CACGCCACCA CCCGCCGTTG CGATGTGCGG CGCGCCGGCA ACGCACCTTG CCGATGTGCA GGGCGCCGGG GCCACTTCGC CGCTGGTCGG CCTGAACGTC GAGATCGAAG CCGTCGTGAC CGCCGACTAT AGTGGCGCCA CCGGCTTTAA CGGCTTCTTC GTGCAACAAC CCGACGCGCA GCGCCGCCGG TTGTCTGGCG TGTCGGAAGG CCTGTTCGTC TATGCGCCCG GCGTCAGCGC CCGCGCTGGT GACCTCGTCC ACCTGGTCGG CAAGGTGGAC GAGAGGTACG GCCAGACGCA ACTGACGCTG GCCACCGGCG GCATCGCAAG CTGTGCCAGC GGCAACCGCG TGACGCCGGT CGACGTGACA TTGCCCGTGG CCGATGCCAA GGCGTTGTCG GCGTATGAAG GGATGCTCGT GCGCCTGCCG CAGACGCTGA CGGTGAGCGA AACGTACGAG CTTGGGCGCT ACGGCAGCGT CCTGCTCAGC AACGGACGCC TGCCACTGCC GACAAACGTG GCTCCGCCCG CGCATGGCGC AGCCGCGCAG GCCGCGGCCA ATGCGCTGAA CCGCATCGTG CTCGACGATG GCTCCAATCA GCAGAATCCC GCCAGCGTGC GCTATCCAGC GCCCGGCTTG TCGGCAACCA ACCCCGTGCG TGCGGGCTAT ACGGTGAGCG GTGTACAAGG CGTGCTGGAA ATGCGCTACA ACGCCTGGCG CCTGCAGCCC GTGCCGGGCG CGGCTGCACC GGTTTTCAAT GCCGCCGCGA ACCCGCGTGC CGGTGCACCT GTGCGCCACG CGCAGGCGGA TGTGCGCGTG GCTTCGTTCA ACGTACTGAA CTACTTCAAC GGAGACGGCA AAGGCGCCGG CTTTGACGAT CCGGCCAATC GAGGTGCCAA GACACAGGCC GAGTTCGAAC GCCAGGAAGC CAAGATCGTC GCCGCCATCC GCGCCCTCAA TGCCGACGTG GTCGGCCTGA TGGAAATCGA GAACGACGGC TACGGCGACC TCAGCGCCAT CCGCCGCCTG ACAAGCCAGC TCGGGGCCGA CTGGCGCTAT GTCGATCCTG GCGTGCCGAA GCTCGGCGGT GACGCGATCA CGGTAGCCAT CGTCTACAAC AGCCGCACCG TGGAGCCCGT GGGGGCGCCG GCCACGCTGG CGATCGACAA CAGGAACCGC CAGCCGCTGG CGCGCAGCTT CCGGCGCATT GGCGACACGC AGAACTTCAC CGTGGTCGTC AATCACCTGA AGTCCAAGGG CTGTTCTGGT GCGACCGGCA AGGACGCCGA CCAGGGCGAC GGCCAGAGCT GCTGGAACCC AACCCGCGTA CGTGCTGCCG GCCTGATCGC CGACTGGCTG GCGACCTCAC CGACCGGCGT GGCCGATGTG GGCCAGCTCC TCATTGGTGA TCTCAACAGC TATGCCAAGG AAGACCCCGT CGTGCTGTTC GCCCAGAAGG GGTATGCCGA CATGGTGGCG AAGTTCGTCG GCAAGGATGC GTACAGCTAT GTCTACGGCG GCGAATCCGG CTACATCGAT CACGCGCTCG CCACCCCTGG CTTGGCAGAG CGCGTGCGTG CCGTACATGA GTGGCATATC AATGCCGACG AGCCGATCGC GCTCGAATAC GCGTTCGGCC ACAAGAGCGC AGAGCAACAA CAAACGTTCT ACGCACCGGA CGCGTACCGC TCGTCGGATC ATGACCCGGT GCTGGTCGAC CTCGCCCTCA ATACGCAGAC CGCAGGTGGC GGCACGAGCC CGGAAGGCGA TGCGGCGGCG GGTGCGGCTA CGGGCAGCAC AGGGGTGGGG GGTGCCGGTG CGGTGGACCC GATTCTCGGG CTCGTACTGG CCGCCGCTGC GGTAGCCTTG GCGCGGCGTC GTGCGTGTCG GTCTTGA
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Protein sequence | MRLHFLLAAV LSVALPAQAE LLISEYVEGS SNNKAIEIYN PDGAEADLSV YKIEQYNNGA STPTASFALS GKLAPGAVHV MAHSTLASVL GSRVNQTAAF SFNGDDALRL TRSGVVVDRI GQVGYQPPSG FWGTASAGTK DHTLRRQGTV KAGDTDSTAA FNPSLQWDAF NIDDFSDLGL YNGQGTVTPP PAVAMCGAPA THLADVQGAG ATSPLVGLNV EIEAVVTADY SGATGFNGFF VQQPDAQRRR LSGVSEGLFV YAPGVSARAG DLVHLVGKVD ERYGQTQLTL ATGGIASCAS GNRVTPVDVT LPVADAKALS AYEGMLVRLP QTLTVSETYE LGRYGSVLLS NGRLPLPTNV APPAHGAAAQ AAANALNRIV LDDGSNQQNP ASVRYPAPGL SATNPVRAGY TVSGVQGVLE MRYNAWRLQP VPGAAAPVFN AAANPRAGAP VRHAQADVRV ASFNVLNYFN GDGKGAGFDD PANRGAKTQA EFERQEAKIV AAIRALNADV VGLMEIENDG YGDLSAIRRL TSQLGADWRY VDPGVPKLGG DAITVAIVYN SRTVEPVGAP ATLAIDNRNR QPLARSFRRI GDTQNFTVVV NHLKSKGCSG ATGKDADQGD GQSCWNPTRV RAAGLIADWL ATSPTGVADV GQLLIGDLNS YAKEDPVVLF AQKGYADMVA KFVGKDAYSY VYGGESGYID HALATPGLAE RVRAVHEWHI NADEPIALEY AFGHKSAEQQ QTFYAPDAYR SSDHDPVLVD LALNTQTAGG GTSPEGDAAA GAATGSTGVG GAGAVDPILG LVLAAAAVAL ARRRACRS
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