| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0757 |
|---|
| Symbol | |
|---|
| ID | 6286391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 795723 |
|---|
| End bp | 796589 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642624321 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_001898340 |
|---|
| Protein GI | 187927853 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.935383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0580671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACG CATGGCGTGC CGTCACCGAT CGTTCAGCAT TCTGTAAGCC GTTCCTTCCT
CGCAGCCCGC GCTCACCAAA AAATGAAACA AGCGTCGACG CTGCAGTCGG CGTGTTGTCT
ACGTGGGACC GATACAGAAT CGCGAAAATT TATGGATTTC TGTACCTGTT GGCCGAATCG
CGGCCAGTGC TAGCCTGCAA GCTCTTCGCC CTTTCCGCAG ACAGCGATTT CGCCATGCCT
ACCCTCACCA ATCTGCTCAC CTTTGCCTTG GTTGCGCTCG GCATGGTGCT GACGCCGGGC
CCGAACATGA TCTACCTAAT CTCGCGTTCG ATCTGCCAGG GGCGCAACGC CGGGCTGGTG
TCGCTGGCGG GCATCGCCAC GGGCTTCGTT TTCTACATGC TGTGCGCCGC ATTCGGCATC
ACCGCCTTGC TGATGGCCGT GCCGTTTGCC TACGATGCGC TGCGCTTTGG CGGTGCGATC
TATCTGCTGT ACCTCGCCTG GCAGGCGGTG CGGCCGGGCG GCCGGGCACC GTTCCAGGTG
CGTGAACTAC CGGTGGACAG CCCGCGCAAG CTTTACACGA TGGGCTTGCT GACCAGCCTG
CTCAATCCGA AGGTCGCAGT GCTCTATCTG TCGCTGCTGC CGCAGTTCAT CGAGCCGGCG
CACGGCAGCG TGCTGGTGCA GTCGGTCTGC CTGGGGCTCA CGCAGATCTG CGTGAGCGTG
ACCGTCAATT CGATGATTGC CGCGACGGCG GGCAGCATCG CCGCGTTTCT CTCGCGCAAG
CCGAGCTGGC TGTCGGTTCA GCGCTACCTG ATGGGCACCG TGCTGACGAG CCTGGCGCTG
CGCATGGCGA TGGAAGCGCG CAAGTAG
|
|---|
| Protein sequence | MTHAWRAVTD RSAFCKPFLP RSPRSPKNET SVDAAVGVLS TWDRYRIAKI YGFLYLLAES
RPVLACKLFA LSADSDFAMP TLTNLLTFAL VALGMVLTPG PNMIYLISRS ICQGRNAGLV
SLAGIATGFV FYMLCAAFGI TALLMAVPFA YDALRFGGAI YLLYLAWQAV RPGGRAPFQV
RELPVDSPRK LYTMGLLTSL LNPKVAVLYL SLLPQFIEPA HGSVLVQSVC LGLTQICVSV
TVNSMIAATA GSIAAFLSRK PSWLSVQRYL MGTVLTSLAL RMAMEARK
|
|---|
| |