Gene Rpic_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0752 
Symbol 
ID6287560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp792647 
End bp793432 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID642624316 
Productaldolase II superfamily protein 
Protein accessionYP_001898335 
Protein GI187927848 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.322405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG CCTTGCGCCC CGATGCCGTT GTGCCCGGCG GCGAGATCAG CCAAGCCGAG 
CGCGCTGTGC GGGTCGACCT TGCCGCCGCG TACCGACTGG CCGCGCTCAA CGGTTGGGAC
GATCTGGTCT ACACCCATCT GTCTGCGTCC GTGCCGGGCG AGCCTGATCA CTTCCTGATC
AACGCTTTCG GCCTCGCGTT CGACGAGATC ACCGCATCCA ACCTGGTCAA GATCAATGGC
CGCGGCCAGC TCGTCGGCGT CTGGCCCGAT GCGGCCACGC ATCCCTCCGT TAACGTGACC
GGTTTCGCAT TGCACGCAGC CGTGCACGCC GCCCGGCCCG ACGCGCAGTG CGTGATCCAT
CTGCATAACA CGGCGGGCAT TGCCGTGTCT GCGCAGAAGC ACGGGCTGTT GCCGCTGTCT
CAGCATGCGC TGCGGTTTCA CCGGCGCATC GCGTATCACG ATTACGAAGG CCTTGCGTTC
ACGCCGGAAG AGGGCAGCCG CCTTACCGCA TCGTTGGGCA ACCGTTTCGC CATGTTGCTG
CGCAATCACG GAACGCTGAC CATCGGCCGT ACCGTGGCCG AGGCGCACGT GCTGATGGCC
ACGCTCATCA AGGCATGCGA GATCCAGATT CACGCGCTTG CGGGCGGCGA GGTCGTCGCG
CCGGCGCCGG AAGTGGCAGA GCGTTCGGCA GAGCAGCTCG AAGATGGCGG CGCCATCGAA
GGCGTGATCG AGTGGCCGGC GCTGTTGCGC AAACTGGATA AAATCGACGC TTCGTATCGC
GACTGA
 
Protein sequence
MSFALRPDAV VPGGEISQAE RAVRVDLAAA YRLAALNGWD DLVYTHLSAS VPGEPDHFLI 
NAFGLAFDEI TASNLVKING RGQLVGVWPD AATHPSVNVT GFALHAAVHA ARPDAQCVIH
LHNTAGIAVS AQKHGLLPLS QHALRFHRRI AYHDYEGLAF TPEEGSRLTA SLGNRFAMLL
RNHGTLTIGR TVAEAHVLMA TLIKACEIQI HALAGGEVVA PAPEVAERSA EQLEDGGAIE
GVIEWPALLR KLDKIDASYR D